Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.88■□□□□ 0.77
CDK3Q00526 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.88■□□□□ 0.77
CDK3Q00526 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK3Q00526 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CDK3Q00526 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK3Q00526 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CDK3Q00526 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.88■□□□□ 0.77
CDK3Q00526 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.88■□□□□ 0.77
CDK3Q00526 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.88■□□□□ 0.77
CDK3Q00526 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.88■□□□□ 0.77
CDK3Q00526 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CDK3Q00526 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK3Q00526 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK3Q00526 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.88■□□□□ 0.77
CDK3Q00526 PKD1P6-201ENST00000343738 4769 ntBASIC19.88■□□□□ 0.77
CDK3Q00526 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDK3Q00526 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.87■□□□□ 0.77
CDK3Q00526 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.87■□□□□ 0.77
CDK3Q00526 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDK3Q00526 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.87■□□□□ 0.77
CDK3Q00526 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.87■□□□□ 0.77
CDK3Q00526 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
CDK3Q00526 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.87■□□□□ 0.77
CDK3Q00526 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDK3Q00526 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CDK3Q00526 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CDK3Q00526 GCSHP5-201ENST00000443090 522 ntBASIC19.87■□□□□ 0.77
CDK3Q00526 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.87■□□□□ 0.77
CDK3Q00526 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDK3Q00526 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDK3Q00526 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.87■□□□□ 0.77
CDK3Q00526 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.87■□□□□ 0.77
CDK3Q00526 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.87■□□□□ 0.77
CDK3Q00526 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.87■□□□□ 0.77
CDK3Q00526 AC092720.2-201ENST00000602388 1665 ntBASIC19.87■□□□□ 0.77
CDK3Q00526 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CDK3Q00526 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDK3Q00526 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK3Q00526 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.86■□□□□ 0.77
CDK3Q00526 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CDK3Q00526 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK3Q00526 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.86■□□□□ 0.77
CDK3Q00526 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.86■□□□□ 0.77
CDK3Q00526 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.86■□□□□ 0.77
CDK3Q00526 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK3Q00526 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.86■□□□□ 0.77
CDK3Q00526 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK3Q00526 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDK3Q00526 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK3Q00526 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDK3Q00526 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.86■□□□□ 0.77
CDK3Q00526 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.86■□□□□ 0.77
CDK3Q00526 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK3Q00526 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK3Q00526 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDK3Q00526 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK3Q00526 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CDK3Q00526 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.85■□□□□ 0.77
CDK3Q00526 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.85■□□□□ 0.77
CDK3Q00526 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDK3Q00526 DPP3P2-201ENST00000416030 1696 ntBASIC19.85■□□□□ 0.77
CDK3Q00526 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CDK3Q00526 RPS2P52-201ENST00000469610 820 ntBASIC19.85■□□□□ 0.77
CDK3Q00526 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK3Q00526 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CDK3Q00526 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.85■□□□□ 0.77
CDK3Q00526 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDK3Q00526 AC142381.4-202ENST00000563973 229 ntBASIC19.85■□□□□ 0.77
CDK3Q00526 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK3Q00526 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CDK3Q00526 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.85■□□□□ 0.77
CDK3Q00526 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CDK3Q00526 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.84■□□□□ 0.77
CDK3Q00526 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDK3Q00526 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK3Q00526 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK3Q00526 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDK3Q00526 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.84■□□□□ 0.77
CDK3Q00526 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.84■□□□□ 0.77
CDK3Q00526 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDK3Q00526 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDK3Q00526 HLA-G-202ENST00000376815 851 ntBASIC19.84■□□□□ 0.77
CDK3Q00526 HLA-G-203ENST00000376818 1127 ntBASIC19.84■□□□□ 0.77
CDK3Q00526 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.84■□□□□ 0.77
CDK3Q00526 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDK3Q00526 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CDK3Q00526 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CDK3Q00526 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.84■□□□□ 0.77
CDK3Q00526 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.84■□□□□ 0.77
CDK3Q00526 RN7SL471P-201ENST00000580476 299 ntBASIC19.84■□□□□ 0.77
CDK3Q00526 AL031963.3-201ENST00000606441 850 ntBASIC19.84■□□□□ 0.77
CDK3Q00526 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK3Q00526 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK3Q00526 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK3Q00526 KRT8P20-201ENST00000423953 1409 ntBASIC19.84■□□□□ 0.77
CDK3Q00526 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.84■□□□□ 0.77
CDK3Q00526 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDK3Q00526 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDK3Q00526 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDK3Q00526 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms