Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H3F3AP84243 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
H3F3AP84243 PTBP1P-201ENST00000554374 1601 ntBASIC18.05■□□□□ 0.48
H3F3AP84243 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H3F3AP84243 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
H3F3AP84243 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.04■□□□□ 0.48
H3F3AP84243 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.04■□□□□ 0.48
H3F3AP84243 LINC01521-201ENST00000504184 1943 ntBASIC18.04■□□□□ 0.48
H3F3AP84243 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
H3F3AP84243 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
H3F3AP84243 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
H3F3AP84243 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
H3F3AP84243 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.04■□□□□ 0.48
H3F3AP84243 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
H3F3AP84243 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.04■□□□□ 0.48
H3F3AP84243 AC097658.1-201ENST00000475555 843 ntBASIC18.04■□□□□ 0.48
H3F3AP84243 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
H3F3AP84243 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.04■□□□□ 0.48
H3F3AP84243 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
H3F3AP84243 AC098934.4-201ENST00000564127 592 ntBASIC18.04■□□□□ 0.48
H3F3AP84243 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
H3F3AP84243 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
H3F3AP84243 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.04■□□□□ 0.48
H3F3AP84243 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
H3F3AP84243 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.04■□□□□ 0.48
H3F3AP84243 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
H3F3AP84243 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
H3F3AP84243 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
H3F3AP84243 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
H3F3AP84243 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
H3F3AP84243 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
H3F3AP84243 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
H3F3AP84243 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.03■□□□□ 0.48
H3F3AP84243 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
H3F3AP84243 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
H3F3AP84243 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
H3F3AP84243 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H3F3AP84243 AL355802.2-201ENST00000402069 882 ntBASIC18.03■□□□□ 0.48
H3F3AP84243 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.03■□□□□ 0.48
H3F3AP84243 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.03■□□□□ 0.48
H3F3AP84243 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.03■□□□□ 0.48
H3F3AP84243 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
H3F3AP84243 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.03■□□□□ 0.48
H3F3AP84243 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
H3F3AP84243 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.03■□□□□ 0.48
H3F3AP84243 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.03■□□□□ 0.48
H3F3AP84243 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.03■□□□□ 0.48
H3F3AP84243 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.03■□□□□ 0.48
H3F3AP84243 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H3F3AP84243 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H3F3AP84243 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H3F3AP84243 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H3F3AP84243 AL512408.1-201ENST00000569378 2000 ntBASIC18.03■□□□□ 0.48
H3F3AP84243 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
H3F3AP84243 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
H3F3AP84243 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H3F3AP84243 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
H3F3AP84243 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
H3F3AP84243 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H3F3AP84243 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H3F3AP84243 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H3F3AP84243 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H3F3AP84243 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H3F3AP84243 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
H3F3AP84243 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H3F3AP84243 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
H3F3AP84243 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
H3F3AP84243 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
H3F3AP84243 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
H3F3AP84243 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
H3F3AP84243 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.02■□□□□ 0.47
H3F3AP84243 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.02■□□□□ 0.47
H3F3AP84243 DPP3P2-201ENST00000416030 1696 ntBASIC18.02■□□□□ 0.47
H3F3AP84243 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
H3F3AP84243 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
H3F3AP84243 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
H3F3AP84243 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H3F3AP84243 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
H3F3AP84243 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.01■□□□□ 0.47
H3F3AP84243 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H3F3AP84243 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.01■□□□□ 0.47
H3F3AP84243 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H3F3AP84243 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H3F3AP84243 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
H3F3AP84243 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
H3F3AP84243 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.01■□□□□ 0.47
H3F3AP84243 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H3F3AP84243 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H3F3AP84243 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
H3F3AP84243 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
H3F3AP84243 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
H3F3AP84243 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.01■□□□□ 0.47
H3F3AP84243 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.01■□□□□ 0.47
H3F3AP84243 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.01■□□□□ 0.47
H3F3AP84243 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
H3F3AP84243 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H3F3AP84243 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
H3F3AP84243 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
H3F3AP84243 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
H3F3AP84243 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms