Protein–RNA interactions for Protein: P53867

ATG4, Cysteine protease ATG4, yeastyeast

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG4P53867 RRT15YLR162W-A 189 nt2.3□□□□□ -2.04
ATG4P53867 YNL114CYNL114C 372 nt2.3□□□□□ -2.04
ATG4P53867 YBL083CYBL083C 426 nt2.3□□□□□ -2.04
ATG4P53867 YOR170WYOR170W 306 nt2.3□□□□□ -2.04
ATG4P53867 YOR394C-AYOR394C-A 168 nt2.3□□□□□ -2.04
ATG4P53867 RRP6YOR001W 2202 nt2.3□□□□□ -2.04
ATG4P53867 TRA1YHR099W 11235 nt2.3□□□□□ -2.04
ATG4P53867 CSF1YLR087C 8877 nt2.29□□□□□ -2.04
ATG4P53867 AXL1YPR122W 3627 nt2.29□□□□□ -2.04
ATG4P53867 CRM1YGR218W 3255 nt2.29□□□□□ -2.04
ATG4P53867 MUK1YPL070W 1839 nt2.29□□□□□ -2.04
ATG4P53867 RPS22AYJL190C 393 nt2.29□□□□□ -2.04
ATG4P53867 YLR140WYLR140W 327 nt2.29□□□□□ -2.04
ATG4P53867 YPR092WYPR092W 306 nt2.29□□□□□ -2.04
ATG4P53867 PTP3YER075C 2787 nt2.29□□□□□ -2.04
ATG4P53867 VPS54YDR027C 2670 nt2.29□□□□□ -2.04
ATG4P53867 BCK1YJL095W 4437 nt2.28□□□□□ -2.04
ATG4P53867 RPH1YER169W 2391 nt2.28□□□□□ -2.04
ATG4P53867 INP53YOR109W 3324 nt2.28□□□□□ -2.04
ATG4P53867 MPT5YGL178W 2580 nt2.28□□□□□ -2.04
ATG4P53867 MNL2YLR057W 2550 nt2.28□□□□□ -2.04
ATG4P53867 YEF3YLR249W 3135 nt2.28□□□□□ -2.04
ATG4P53867 CBF2YGR140W 2871 nt2.28□□□□□ -2.05
ATG4P53867 SWA2YDR320C 2007 nt2.27□□□□□ -2.05
ATG4P53867 YNL018CYNL018C 1839 nt2.27□□□□□ -2.05
ATG4P53867 snR72snR72 98 nt2.27□□□□□ -2.05
ATG4P53867 snR74snR74 88 nt2.27□□□□□ -2.05
ATG4P53867 RPB10YOR210W 213 nt2.27□□□□□ -2.05
ATG4P53867 YIL174WYIL174W 228 nt2.26□□□□□ -2.05
ATG4P53867 YJL222W-AYJL222W-A 228 nt2.26□□□□□ -2.05
ATG4P53867 SEC26YDR238C 2922 nt2.26□□□□□ -2.05
ATG4P53867 SWI6YLR182W 2412 nt2.26□□□□□ -2.05
ATG4P53867 SEC5YDR166C 2916 nt2.25□□□□□ -2.05
ATG4P53867 FAR11YNL127W 2862 nt2.25□□□□□ -2.05
ATG4P53867 SET2YJL168C 2202 nt2.25□□□□□ -2.05
ATG4P53867 YMR194C-AYMR194C-A 225 nt2.25□□□□□ -2.05
ATG4P53867 YBR182C-AYBR182C-A 195 nt2.25□□□□□ -2.05
ATG4P53867 RPO41YFL036W 4056 nt2.25□□□□□ -2.05
ATG4P53867 IRA2YOL081W 9240 nt2.25□□□□□ -2.05
ATG4P53867 KRE33YNL132W 3171 nt2.24□□□□□ -2.05
ATG4P53867 YGL217CYGL217C 342 nt2.24□□□□□ -2.05
ATG4P53867 RPS29AYLR388W 171 nt2.24□□□□□ -2.05
ATG4P53867 YNL170WYNL170W 396 nt2.24□□□□□ -2.05
ATG4P53867 RFX1YLR176C 2436 nt2.24□□□□□ -2.05
ATG4P53867 MGM1YOR211C 2646 nt2.24□□□□□ -2.05
ATG4P53867 SWI5YDR146C 2130 nt2.24□□□□□ -2.05
ATG4P53867 PDR1YGL013C 3207 nt2.24□□□□□ -2.05
ATG4P53867 VTC3YPL019C 2508 nt2.24□□□□□ -2.05
ATG4P53867 GIS1YDR096W 2685 nt2.24□□□□□ -2.05
ATG4P53867 YHR073W-AYHR073W-A 177 nt2.23□□□□□ -2.05
ATG4P53867 YNL097C-BYNL097C-B 123 nt2.23□□□□□ -2.05
ATG4P53867 YOR376WYOR376W 369 nt2.23□□□□□ -2.05
ATG4P53867 CDC53YDL132W 2448 nt2.23□□□□□ -2.05
ATG4P53867 RAV1YJR033C 4074 nt2.22□□□□□ -2.05
ATG4P53867 EDS1YBR033W 2760 nt2.22□□□□□ -2.05
ATG4P53867 YKU70YMR284W 1809 nt2.22□□□□□ -2.05
ATG4P53867 ESL2YKR096W 3588 nt2.22□□□□□ -2.05
ATG4P53867 SLM1YIL105C 2061 nt2.22□□□□□ -2.05
ATG4P53867 GIP3YPL137C 3831 nt2.21□□□□□ -2.06
ATG4P53867 MRD1YPR112C 2664 nt2.21□□□□□ -2.06
ATG4P53867 PAU8YAL068C 363 nt2.21□□□□□ -2.06
ATG4P53867 PAU18YLL064C 363 nt2.21□□□□□ -2.06
ATG4P53867 PAU6YNR076W 363 nt2.21□□□□□ -2.06
ATG4P53867 PAU20YOL161C 363 nt2.21□□□□□ -2.06
ATG4P53867 YBR131C-AYBR131C-A 90 nt2.21□□□□□ -2.06
ATG4P53867 LYS14YDR034C 2373 nt2.21□□□□□ -2.06
ATG4P53867 IRR1YIL026C 3453 nt2.21□□□□□ -2.06
ATG4P53867 UBR1YGR184C 5853 nt2.2□□□□□ -2.06
ATG4P53867 SGS1YMR190C 4344 nt2.2□□□□□ -2.06
ATG4P53867 YCR043CYCR043C 384 nt2.2□□□□□ -2.06
ATG4P53867 YIR030W-AYIR030W-A 384 nt2.2□□□□□ -2.06
ATG4P53867 KTI11YBL071W-A 249 nt2.2□□□□□ -2.06
ATG4P53867 SGF11YPL047W 300 nt2.2□□□□□ -2.06
ATG4P53867 SPC98YNL126W 2541 nt2.19□□□□□ -2.06
ATG4P53867 MRP10YDL045W-A 288 nt2.19□□□□□ -2.06
ATG4P53867 YHR071C-AYHR071C-A 321 nt2.19□□□□□ -2.06
ATG4P53867 YCL046WYCL046W 324 nt2.19□□□□□ -2.06
ATG4P53867 CLN3YAL040C 1743 nt2.19□□□□□ -2.06
ATG4P53867 SLY1YDR189W 2001 nt2.18□□□□□ -2.06
ATG4P53867 SCP160YJL080C 3669 nt2.18□□□□□ -2.06
ATG4P53867 NIP100YPL174C 2607 nt2.18□□□□□ -2.06
ATG4P53867 RPS27BYHR021C 249 nt2.18□□□□□ -2.06
ATG4P53867 SRO77YBL106C 3033 nt2.17□□□□□ -2.06
ATG4P53867 EMP24YGL200C 612 nt2.17□□□□□ -2.06
ATG4P53867 YIL156W-BYIL156W-B 222 nt2.17□□□□□ -2.06
ATG4P53867 YOR218CYOR218C 420 nt2.17□□□□□ -2.06
ATG4P53867 ZRG8YER033C 3231 nt2.17□□□□□ -2.06
ATG4P53867 SDH6YDR379C-A 240 nt2.16□□□□□ -2.06
ATG4P53867 Q0143Q0143 153 nt2.16□□□□□ -2.06
ATG4P53867 snR46snR46 197 nt2.16□□□□□ -2.06
ATG4P53867 TOF1YNL273W 3717 nt2.16□□□□□ -2.06
ATG4P53867 BNI1YNL271C 5862 nt2.15□□□□□ -2.06
ATG4P53867 PDR11YIL013C 4236 nt2.15□□□□□ -2.06
ATG4P53867 YKL165C-AYKL165C-A 234 nt2.15□□□□□ -2.07
ATG4P53867 YBL012CYBL012C 402 nt2.15□□□□□ -2.07
ATG4P53867 APL5YPL195W 2799 nt2.14□□□□□ -2.07
ATG4P53867 SRP14YDL092W 441 nt2.14□□□□□ -2.07
ATG4P53867 VTC1YER072W 390 nt2.14□□□□□ -2.07
ATG4P53867 YHR180W-AYHR180W-A 183 nt2.14□□□□□ -2.07
ATG4P53867 YOR055WYOR055W 435 nt2.14□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 222.4 ms