Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.67■□□□□ 0.9
ITGA8P53708 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.67■□□□□ 0.9
ITGA8P53708 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.67■□□□□ 0.9
ITGA8P53708 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ITGA8P53708 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.67■□□□□ 0.9
ITGA8P53708 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.67■□□□□ 0.9
ITGA8P53708 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA8P53708 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA8P53708 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA8P53708 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA8P53708 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA8P53708 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA8P53708 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA8P53708 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA8P53708 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA8P53708 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA8P53708 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA8P53708 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA8P53708 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA8P53708 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA8P53708 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.66■□□□□ 0.9
ITGA8P53708 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA8P53708 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA8P53708 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ITGA8P53708 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA8P53708 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
ITGA8P53708 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA8P53708 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA8P53708 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA8P53708 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.65■□□□□ 0.9
ITGA8P53708 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.65■□□□□ 0.9
ITGA8P53708 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.65■□□□□ 0.9
ITGA8P53708 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA8P53708 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ITGA8P53708 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA8P53708 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA8P53708 AC098818.2-201ENST00000564925 2320 ntBASIC20.65■□□□□ 0.9
ITGA8P53708 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.65■□□□□ 0.9
ITGA8P53708 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA8P53708 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA8P53708 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA8P53708 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA8P53708 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ITGA8P53708 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
ITGA8P53708 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ITGA8P53708 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.9
ITGA8P53708 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
ITGA8P53708 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ITGA8P53708 AL020996.1-203ENST00000536896 2307 ntBASIC20.64■□□□□ 0.89
ITGA8P53708 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ITGA8P53708 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.64■□□□□ 0.89
ITGA8P53708 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.64■□□□□ 0.89
ITGA8P53708 FAM21FP-204ENST00000608637 956 ntBASIC20.64■□□□□ 0.89
ITGA8P53708 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.64■□□□□ 0.89
ITGA8P53708 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ITGA8P53708 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.89
ITGA8P53708 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ITGA8P53708 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.64■□□□□ 0.89
ITGA8P53708 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA8P53708 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA8P53708 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ITGA8P53708 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA8P53708 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.63■□□□□ 0.89
ITGA8P53708 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA8P53708 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA8P53708 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA8P53708 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.63■□□□□ 0.89
ITGA8P53708 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.63■□□□□ 0.89
ITGA8P53708 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.63■□□□□ 0.89
ITGA8P53708 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.63■□□□□ 0.89
ITGA8P53708 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.63■□□□□ 0.89
ITGA8P53708 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ITGA8P53708 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.63■□□□□ 0.89
ITGA8P53708 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.63■□□□□ 0.89
ITGA8P53708 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.63■□□□□ 0.89
ITGA8P53708 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ITGA8P53708 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA8P53708 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA8P53708 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA8P53708 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA8P53708 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA8P53708 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA8P53708 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITGA8P53708 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITGA8P53708 BX323043.1-201ENST00000641006 1765 ntBASIC20.62■□□□□ 0.89
ITGA8P53708 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITGA8P53708 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITGA8P53708 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITGA8P53708 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ITGA8P53708 ZNRF2P3-201ENST00000424200 374 ntBASIC20.62■□□□□ 0.89
ITGA8P53708 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.62■□□□□ 0.89
ITGA8P53708 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.62■□□□□ 0.89
ITGA8P53708 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.62■□□□□ 0.89
ITGA8P53708 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.62■□□□□ 0.89
ITGA8P53708 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ITGA8P53708 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ITGA8P53708 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITGA8P53708 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.62■□□□□ 0.89
ITGA8P53708 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITGA8P53708 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms