Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDX1P52945 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDX1P52945 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PDX1P52945 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDX1P52945 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.59■□□□□ 0.73
PDX1P52945 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PDX1P52945 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDX1P52945 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDX1P52945 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.59■□□□□ 0.73
PDX1P52945 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
PDX1P52945 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
PDX1P52945 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.59■□□□□ 0.73
PDX1P52945 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.59■□□□□ 0.73
PDX1P52945 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDX1P52945 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDX1P52945 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.59■□□□□ 0.73
PDX1P52945 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.59■□□□□ 0.73
PDX1P52945 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDX1P52945 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDX1P52945 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDX1P52945 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.59■□□□□ 0.73
PDX1P52945 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDX1P52945 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDX1P52945 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDX1P52945 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.58■□□□□ 0.73
PDX1P52945 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.58■□□□□ 0.73
PDX1P52945 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PDX1P52945 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDX1P52945 AC133681.1-201ENST00000465482 601 ntBASIC19.58■□□□□ 0.72
PDX1P52945 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDX1P52945 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.58■□□□□ 0.72
PDX1P52945 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.58■□□□□ 0.72
PDX1P52945 AC005829.2-201ENST00000571422 1056 ntBASIC19.58■□□□□ 0.72
PDX1P52945 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.58■□□□□ 0.72
PDX1P52945 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.58■□□□□ 0.72
PDX1P52945 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.58■□□□□ 0.72
PDX1P52945 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PDX1P52945 AL023875.1-201ENST00000640777 796 ntBASIC19.58■□□□□ 0.72
PDX1P52945 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PDX1P52945 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDX1P52945 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PDX1P52945 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PDX1P52945 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PDX1P52945 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDX1P52945 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDX1P52945 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDX1P52945 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDX1P52945 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDX1P52945 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.57■□□□□ 0.72
PDX1P52945 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDX1P52945 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.57■□□□□ 0.72
PDX1P52945 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDX1P52945 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.57■□□□□ 0.72
PDX1P52945 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.57■□□□□ 0.72
PDX1P52945 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDX1P52945 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDX1P52945 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDX1P52945 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PDX1P52945 RPS2P55-201ENST00000397318 883 ntBASIC19.57■□□□□ 0.72
PDX1P52945 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDX1P52945 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDX1P52945 AC107956.1-201ENST00000494359 873 ntBASIC19.57■□□□□ 0.72
PDX1P52945 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDX1P52945 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.57■□□□□ 0.72
PDX1P52945 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PDX1P52945 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.57■□□□□ 0.72
PDX1P52945 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.57■□□□□ 0.72
PDX1P52945 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PDX1P52945 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.57■□□□□ 0.72
PDX1P52945 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDX1P52945 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDX1P52945 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDX1P52945 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDX1P52945 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
PDX1P52945 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDX1P52945 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDX1P52945 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDX1P52945 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.56■□□□□ 0.72
PDX1P52945 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PDX1P52945 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDX1P52945 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.56■□□□□ 0.72
PDX1P52945 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDX1P52945 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PDX1P52945 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PDX1P52945 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDX1P52945 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDX1P52945 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.56■□□□□ 0.72
PDX1P52945 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PDX1P52945 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDX1P52945 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.56■□□□□ 0.72
PDX1P52945 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.56■□□□□ 0.72
PDX1P52945 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDX1P52945 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDX1P52945 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PDX1P52945 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.56■□□□□ 0.72
PDX1P52945 AC120498.8-201ENST00000614275 531 ntBASIC19.56■□□□□ 0.72
PDX1P52945 AC006557.6-201ENST00000623071 864 ntBASIC19.56■□□□□ 0.72
PDX1P52945 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDX1P52945 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDX1P52945 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms