Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRIM2P49643 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.14■□□□□ 0.65
PRIM2P49643 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.14■□□□□ 0.65
PRIM2P49643 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRIM2P49643 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRIM2P49643 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
PRIM2P49643 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRIM2P49643 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRIM2P49643 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRIM2P49643 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRIM2P49643 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.14■□□□□ 0.65
PRIM2P49643 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRIM2P49643 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.13■□□□□ 0.65
PRIM2P49643 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PRIM2P49643 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRIM2P49643 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRIM2P49643 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRIM2P49643 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.13■□□□□ 0.65
PRIM2P49643 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRIM2P49643 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRIM2P49643 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.13■□□□□ 0.65
PRIM2P49643 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRIM2P49643 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRIM2P49643 AL162430.1-201ENST00000480705 870 ntBASIC19.13■□□□□ 0.65
PRIM2P49643 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRIM2P49643 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.13■□□□□ 0.65
PRIM2P49643 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRIM2P49643 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PRIM2P49643 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRIM2P49643 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRIM2P49643 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRIM2P49643 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRIM2P49643 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRIM2P49643 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRIM2P49643 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PRIM2P49643 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.12■□□□□ 0.65
PRIM2P49643 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRIM2P49643 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRIM2P49643 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PRIM2P49643 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRIM2P49643 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
PRIM2P49643 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.12■□□□□ 0.65
PRIM2P49643 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRIM2P49643 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PRIM2P49643 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRIM2P49643 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRIM2P49643 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRIM2P49643 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRIM2P49643 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.12■□□□□ 0.65
PRIM2P49643 AC016769.1-201ENST00000409132 1010 ntBASIC19.12■□□□□ 0.65
PRIM2P49643 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.12■□□□□ 0.65
PRIM2P49643 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.12■□□□□ 0.65
PRIM2P49643 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.12■□□□□ 0.65
PRIM2P49643 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PRIM2P49643 AC010536.3-201ENST00000620306 533 ntBASIC19.12■□□□□ 0.65
PRIM2P49643 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRIM2P49643 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRIM2P49643 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PRIM2P49643 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRIM2P49643 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRIM2P49643 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRIM2P49643 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PRIM2P49643 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.12■□□□□ 0.65
PRIM2P49643 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
PRIM2P49643 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRIM2P49643 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRIM2P49643 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRIM2P49643 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRIM2P49643 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PRIM2P49643 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRIM2P49643 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.11■□□□□ 0.65
PRIM2P49643 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRIM2P49643 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRIM2P49643 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRIM2P49643 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.11■□□□□ 0.65
PRIM2P49643 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
PRIM2P49643 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRIM2P49643 TERF1P5-201ENST00000477545 1207 ntBASIC19.11■□□□□ 0.65
PRIM2P49643 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.11■□□□□ 0.65
PRIM2P49643 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.11■□□□□ 0.65
PRIM2P49643 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.11■□□□□ 0.65
PRIM2P49643 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
PRIM2P49643 MIR2861-201ENST00000636310 90 ntBASIC19.11■□□□□ 0.65
PRIM2P49643 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRIM2P49643 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PRIM2P49643 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.11■□□□□ 0.65
PRIM2P49643 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRIM2P49643 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.11■□□□□ 0.65
PRIM2P49643 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRIM2P49643 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.1■□□□□ 0.65
PRIM2P49643 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRIM2P49643 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PRIM2P49643 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PRIM2P49643 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRIM2P49643 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PRIM2P49643 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PRIM2P49643 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.1■□□□□ 0.65
PRIM2P49643 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.1■□□□□ 0.65
PRIM2P49643 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PRIM2P49643 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms