Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC9A3P48764 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC9A3P48764 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SLC9A3P48764 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC9A3P48764 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SLC9A3P48764 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC9A3P48764 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC9A3P48764 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.43■□□□□ 0.54
SLC9A3P48764 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC9A3P48764 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC9A3P48764 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC9A3P48764 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC9A3P48764 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC9A3P48764 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC9A3P48764 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC9A3P48764 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC9A3P48764 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC9A3P48764 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC9A3P48764 AC019069.1-201ENST00000610008 1333 ntBASIC18.43■□□□□ 0.54
SLC9A3P48764 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
SLC9A3P48764 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC9A3P48764 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC9A3P48764 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC9A3P48764 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC9A3P48764 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC9A3P48764 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC9A3P48764 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC9A3P48764 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC9A3P48764 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC9A3P48764 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
SLC9A3P48764 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SLC9A3P48764 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC9A3P48764 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC9A3P48764 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
SLC9A3P48764 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SLC9A3P48764 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC9A3P48764 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.42■□□□□ 0.54
SLC9A3P48764 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC9A3P48764 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SLC9A3P48764 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.42■□□□□ 0.54
SLC9A3P48764 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC9A3P48764 AC099778.1-201ENST00000568593 1911 ntBASIC18.42■□□□□ 0.54
SLC9A3P48764 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC9A3P48764 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC9A3P48764 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC9A3P48764 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC9A3P48764 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC9A3P48764 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SLC9A3P48764 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SLC9A3P48764 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC9A3P48764 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SLC9A3P48764 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC9A3P48764 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC9A3P48764 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC9A3P48764 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC9A3P48764 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC9A3P48764 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC9A3P48764 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC9A3P48764 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
SLC9A3P48764 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC9A3P48764 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC9A3P48764 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.41■□□□□ 0.54
SLC9A3P48764 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.41■□□□□ 0.54
SLC9A3P48764 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC9A3P48764 FAM21FP-204ENST00000608637 956 ntBASIC18.41■□□□□ 0.54
SLC9A3P48764 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC9A3P48764 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC9A3P48764 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC9A3P48764 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SLC9A3P48764 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC9A3P48764 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC9A3P48764 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC9A3P48764 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC9A3P48764 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC9A3P48764 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC9A3P48764 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SLC9A3P48764 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC9A3P48764 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC9A3P48764 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
SLC9A3P48764 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC9A3P48764 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC9A3P48764 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC9A3P48764 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC9A3P48764 ZNRF2P3-201ENST00000424200 374 ntBASIC18.4■□□□□ 0.54
SLC9A3P48764 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC9A3P48764 CDV3P1-201ENST00000471403 739 ntBASIC18.4■□□□□ 0.54
SLC9A3P48764 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC9A3P48764 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC9A3P48764 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLC9A3P48764 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
SLC9A3P48764 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC9A3P48764 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC9A3P48764 BX323043.1-201ENST00000641006 1765 ntBASIC18.4■□□□□ 0.54
SLC9A3P48764 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLC9A3P48764 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC9A3P48764 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC9A3P48764 AC018445.3-201ENST00000624177 1945 ntBASIC18.39■□□□□ 0.53
SLC9A3P48764 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC9A3P48764 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC9A3P48764 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms