Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.53■□□□□ 0.72
KRT6CP48668 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT6CP48668 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT6CP48668 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT6CP48668 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT6CP48668 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.53■□□□□ 0.72
KRT6CP48668 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.53■□□□□ 0.72
KRT6CP48668 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.53■□□□□ 0.72
KRT6CP48668 AC137761.2-201ENST00000561729 223 ntBASIC19.53■□□□□ 0.72
KRT6CP48668 AL162412.1-201ENST00000567129 965 ntBASIC19.53■□□□□ 0.72
KRT6CP48668 AC145350.3-201ENST00000569033 163 ntBASIC19.53■□□□□ 0.72
KRT6CP48668 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
KRT6CP48668 AC013268.1-206ENST00000638368 961 ntBASIC19.53■□□□□ 0.72
KRT6CP48668 AC112229.1-201ENST00000639295 961 ntBASIC19.53■□□□□ 0.72
KRT6CP48668 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT6CP48668 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
KRT6CP48668 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
KRT6CP48668 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT6CP48668 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KRT6CP48668 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
KRT6CP48668 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRT6CP48668 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRT6CP48668 DPP3P2-201ENST00000416030 1696 ntBASIC19.52■□□□□ 0.72
KRT6CP48668 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRT6CP48668 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
KRT6CP48668 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.52■□□□□ 0.72
KRT6CP48668 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.52■□□□□ 0.72
KRT6CP48668 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRT6CP48668 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.52■□□□□ 0.72
KRT6CP48668 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
KRT6CP48668 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.52■□□□□ 0.72
KRT6CP48668 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.52■□□□□ 0.72
KRT6CP48668 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
KRT6CP48668 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
KRT6CP48668 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
KRT6CP48668 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
KRT6CP48668 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
KRT6CP48668 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
KRT6CP48668 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
KRT6CP48668 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.52■□□□□ 0.71
KRT6CP48668 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.51■□□□□ 0.71
KRT6CP48668 AC087633.2-202ENST00000565166 1439 ntBASIC19.51■□□□□ 0.71
KRT6CP48668 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT6CP48668 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
KRT6CP48668 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT6CP48668 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT6CP48668 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT6CP48668 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT6CP48668 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT6CP48668 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.51■□□□□ 0.71
KRT6CP48668 AC007322.4-201ENST00000509611 723 ntBASIC19.51■□□□□ 0.71
KRT6CP48668 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.51■□□□□ 0.71
KRT6CP48668 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.51■□□□□ 0.71
KRT6CP48668 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.51■□□□□ 0.71
KRT6CP48668 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KRT6CP48668 AL356652.1-201ENST00000615962 565 ntBASIC19.51■□□□□ 0.71
KRT6CP48668 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.51■□□□□ 0.71
KRT6CP48668 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KRT6CP48668 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT6CP48668 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.51■□□□□ 0.71
KRT6CP48668 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRT6CP48668 TCF3P1-201ENST00000423021 1937 ntBASIC19.51■□□□□ 0.71
KRT6CP48668 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
KRT6CP48668 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT6CP48668 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT6CP48668 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KRT6CP48668 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT6CP48668 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KRT6CP48668 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.5■□□□□ 0.71
KRT6CP48668 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.5■□□□□ 0.71
KRT6CP48668 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT6CP48668 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
KRT6CP48668 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
KRT6CP48668 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT6CP48668 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.5■□□□□ 0.71
KRT6CP48668 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.5■□□□□ 0.71
KRT6CP48668 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.5■□□□□ 0.71
KRT6CP48668 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT6CP48668 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.5■□□□□ 0.71
KRT6CP48668 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.5■□□□□ 0.71
KRT6CP48668 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
KRT6CP48668 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT6CP48668 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT6CP48668 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRT6CP48668 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.5■□□□□ 0.71
KRT6CP48668 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.5■□□□□ 0.71
KRT6CP48668 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
KRT6CP48668 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT6CP48668 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.49■□□□□ 0.71
KRT6CP48668 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT6CP48668 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.49■□□□□ 0.71
KRT6CP48668 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT6CP48668 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRT6CP48668 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.49■□□□□ 0.71
KRT6CP48668 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.49■□□□□ 0.71
KRT6CP48668 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
KRT6CP48668 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.49■□□□□ 0.71
KRT6CP48668 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
KRT6CP48668 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.49■□□□□ 0.71
KRT6CP48668 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms