Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSR2P43308 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.25■□□□□ 0.67
SSR2P43308 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSR2P43308 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSR2P43308 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSR2P43308 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSR2P43308 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSR2P43308 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSR2P43308 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSR2P43308 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SSR2P43308 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSR2P43308 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSR2P43308 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
SSR2P43308 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSR2P43308 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.24■□□□□ 0.67
SSR2P43308 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSR2P43308 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.24■□□□□ 0.67
SSR2P43308 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.24■□□□□ 0.67
SSR2P43308 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.24■□□□□ 0.67
SSR2P43308 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.24■□□□□ 0.67
SSR2P43308 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSR2P43308 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SSR2P43308 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.24■□□□□ 0.67
SSR2P43308 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSR2P43308 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SSR2P43308 SMG8-203ENST00000578922 2178 ntBASIC19.24■□□□□ 0.67
SSR2P43308 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSR2P43308 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.24■□□□□ 0.67
SSR2P43308 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSR2P43308 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
SSR2P43308 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSR2P43308 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSR2P43308 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SSR2P43308 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSR2P43308 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSR2P43308 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSR2P43308 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSR2P43308 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSR2P43308 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSR2P43308 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSR2P43308 LSM12P1-201ENST00000411836 588 ntBASIC19.23■□□□□ 0.67
SSR2P43308 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.23■□□□□ 0.67
SSR2P43308 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.23■□□□□ 0.67
SSR2P43308 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.23■□□□□ 0.67
SSR2P43308 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSR2P43308 KRT17P1-201ENST00000399211 1546 ntBASIC19.23■□□□□ 0.67
SSR2P43308 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.23■□□□□ 0.67
SSR2P43308 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.23■□□□□ 0.67
SSR2P43308 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSR2P43308 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSR2P43308 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.23■□□□□ 0.67
SSR2P43308 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSR2P43308 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.22■□□□□ 0.67
SSR2P43308 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.22■□□□□ 0.67
SSR2P43308 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSR2P43308 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.22■□□□□ 0.67
SSR2P43308 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR2P43308 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR2P43308 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.22■□□□□ 0.67
SSR2P43308 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SSR2P43308 BX276092.2-201ENST00000417668 665 ntBASIC19.22■□□□□ 0.67
SSR2P43308 AC083906.2-201ENST00000511578 360 ntBASIC19.22■□□□□ 0.67
SSR2P43308 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.22■□□□□ 0.67
SSR2P43308 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSR2P43308 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR2P43308 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSR2P43308 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR2P43308 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR2P43308 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SSR2P43308 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.21■□□□□ 0.67
SSR2P43308 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SSR2P43308 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSR2P43308 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSR2P43308 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSR2P43308 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSR2P43308 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.21■□□□□ 0.67
SSR2P43308 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
SSR2P43308 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.21■□□□□ 0.67
SSR2P43308 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.21■□□□□ 0.67
SSR2P43308 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.21■□□□□ 0.67
SSR2P43308 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSR2P43308 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.21■□□□□ 0.67
SSR2P43308 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.21■□□□□ 0.67
SSR2P43308 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSR2P43308 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SSR2P43308 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.2■□□□□ 0.66
SSR2P43308 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.2■□□□□ 0.66
SSR2P43308 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
SSR2P43308 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
SSR2P43308 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms