Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
KDM5CP41229 KSR1P1-201ENST00000446298 240 ntBASIC30.45■■■□□ 2.47
KDM5CP41229 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC30.45■■■□□ 2.47
KDM5CP41229 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC30.45■■■□□ 2.47
KDM5CP41229 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC30.45■■■□□ 2.47
KDM5CP41229 AC010203.1-204ENST00000548782 407 ntBASIC30.45■■■□□ 2.47
KDM5CP41229 WWOX-216ENST00000569818 525 ntBASIC30.45■■■□□ 2.47
KDM5CP41229 WDR88-203ENST00000592765 651 ntTSL 5 BASIC30.45■■■□□ 2.47
KDM5CP41229 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC30.45■■■□□ 2.47
KDM5CP41229 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC30.45■■■□□ 2.47
KDM5CP41229 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.47
KDM5CP41229 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
KDM5CP41229 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
KDM5CP41229 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
KDM5CP41229 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC30.45■■■□□ 2.46
KDM5CP41229 TMA16-209ENST00000513272 803 ntTSL 2 BASIC30.45■■■□□ 2.46
KDM5CP41229 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
KDM5CP41229 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
KDM5CP41229 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC30.44■■■□□ 2.46
KDM5CP41229 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
KDM5CP41229 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.44■■■□□ 2.46
KDM5CP41229 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC30.44■■■□□ 2.46
KDM5CP41229 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.44■■■□□ 2.46
KDM5CP41229 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC30.44■■■□□ 2.46
KDM5CP41229 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.44■■■□□ 2.46
KDM5CP41229 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
KDM5CP41229 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC30.44■■■□□ 2.46
KDM5CP41229 AC004264.1-201ENST00000608354 794 ntBASIC30.44■■■□□ 2.46
KDM5CP41229 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC30.44■■■□□ 2.46
KDM5CP41229 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
KDM5CP41229 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC30.43■■■□□ 2.46
KDM5CP41229 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
KDM5CP41229 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
KDM5CP41229 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
KDM5CP41229 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
KDM5CP41229 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
KDM5CP41229 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC30.43■■■□□ 2.46
KDM5CP41229 PNN-205ENST00000556530 601 ntTSL 2 BASIC30.43■■■□□ 2.46
KDM5CP41229 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
KDM5CP41229 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
KDM5CP41229 ECEL1P1-201ENST00000373592 1742 ntBASIC30.43■■■□□ 2.46
KDM5CP41229 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
KDM5CP41229 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
KDM5CP41229 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
KDM5CP41229 AC104076.2-201ENST00000448912 469 ntBASIC30.42■■■□□ 2.46
KDM5CP41229 AC026271.3-201ENST00000571884 352 ntBASIC30.42■■■□□ 2.46
KDM5CP41229 AC242852.2-201ENST00000615738 1807 ntBASIC30.42■■■□□ 2.46
KDM5CP41229 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
KDM5CP41229 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
KDM5CP41229 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
KDM5CP41229 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
KDM5CP41229 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
KDM5CP41229 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
KDM5CP41229 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
KDM5CP41229 MESTP1-201ENST00000404287 994 ntBASIC30.41■■■□□ 2.46
KDM5CP41229 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
KDM5CP41229 AL137013.1-201ENST00000432946 1228 ntBASIC30.41■■■□□ 2.46
KDM5CP41229 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
KDM5CP41229 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC30.41■■■□□ 2.46
KDM5CP41229 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC30.41■■■□□ 2.46
KDM5CP41229 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
KDM5CP41229 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
KDM5CP41229 STK25-205ENST00000405883 1904 ntTSL 2 BASIC30.41■■■□□ 2.46
KDM5CP41229 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
KDM5CP41229 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
KDM5CP41229 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
KDM5CP41229 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
KDM5CP41229 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC30.41■■■□□ 2.46
KDM5CP41229 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC30.41■■■□□ 2.46
KDM5CP41229 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
KDM5CP41229 MYC-208ENST00000641036 567 ntBASIC30.41■■■□□ 2.46
KDM5CP41229 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
KDM5CP41229 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
KDM5CP41229 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
KDM5CP41229 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
KDM5CP41229 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC30.4■■■□□ 2.46
KDM5CP41229 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
KDM5CP41229 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
KDM5CP41229 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC30.4■■■□□ 2.46
KDM5CP41229 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC30.4■■■□□ 2.46
KDM5CP41229 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC30.4■■■□□ 2.46
KDM5CP41229 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC30.4■■■□□ 2.46
KDM5CP41229 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC30.4■■■□□ 2.46
KDM5CP41229 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
KDM5CP41229 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC30.39■■■□□ 2.46
KDM5CP41229 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
KDM5CP41229 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
KDM5CP41229 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
KDM5CP41229 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
KDM5CP41229 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC30.39■■■□□ 2.46
KDM5CP41229 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
KDM5CP41229 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC30.39■■■□□ 2.46
KDM5CP41229 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
KDM5CP41229 PTBP1P-201ENST00000554374 1601 ntBASIC30.39■■■□□ 2.45
KDM5CP41229 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC30.38■■■□□ 2.45
KDM5CP41229 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
KDM5CP41229 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC30.38■■■□□ 2.45
KDM5CP41229 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC30.38■■■□□ 2.45
KDM5CP41229 C1QL1P1-201ENST00000568105 661 ntBASIC30.38■■■□□ 2.45
KDM5CP41229 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms