Protein–RNA interactions for Protein: P38210

LDB7, Chromatin structure-remodeling complex protein RSC14, yeastyeast

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDB7P38210 HIT1YJR055W 495 nt0.89□□□□□ -2.27
LDB7P38210 HUG1YML058W-A 207 nt0.89□□□□□ -2.27
LDB7P38210 PAU24YBR301W 363 nt0.89□□□□□ -2.27
LDB7P38210 LYS14YDR034C 2373 nt0.89□□□□□ -2.27
LDB7P38210 NUT2YPR168W 474 nt0.88□□□□□ -2.27
LDB7P38210 CDC39YCR093W 6327 nt0.87□□□□□ -2.27
LDB7P38210 YLR146W-AYLR146W-A 189 nt0.87□□□□□ -2.27
LDB7P38210 YMR153C-AYMR153C-A 336 nt0.87□□□□□ -2.27
LDB7P38210 YPR039WYPR039W 336 nt0.87□□□□□ -2.27
LDB7P38210 IFH1YLR223C 3258 nt0.86□□□□□ -2.27
LDB7P38210 DOP1YDR141C 5097 nt0.86□□□□□ -2.27
LDB7P38210 SWI6YLR182W 2412 nt0.86□□□□□ -2.27
LDB7P38210 NUP157YER105C 4176 nt0.86□□□□□ -2.27
LDB7P38210 snR84snR84 550 nt0.86□□□□□ -2.27
LDB7P38210 ILM1YJR118C 612 nt0.86□□□□□ -2.27
LDB7P38210 YMR175W-AYMR175W-A 195 nt0.86□□□□□ -2.27
LDB7P38210 ERP4YOR016C 624 nt0.86□□□□□ -2.27
LDB7P38210 IRC23YOR044W 474 nt0.86□□□□□ -2.27
LDB7P38210 RPL16AYIL133C 600 nt0.85□□□□□ -2.27
LDB7P38210 PAM16YJL104W 450 nt0.85□□□□□ -2.27
LDB7P38210 TMA22YJR014W 597 nt0.85□□□□□ -2.27
LDB7P38210 YKL044WYKL044W 321 nt0.85□□□□□ -2.27
LDB7P38210 BER1YLR412W 825 nt0.85□□□□□ -2.27
LDB7P38210 YBR200W-AYBR200W-A 165 nt0.85□□□□□ -2.27
LDB7P38210 ALY2YJL084C 3141 nt0.85□□□□□ -2.27
LDB7P38210 SCW11YGL028C 1629 nt0.85□□□□□ -2.27
LDB7P38210 APQ13YJL075C 417 nt0.84□□□□□ -2.27
LDB7P38210 RUF22RUF22 515 nt0.84□□□□□ -2.27
LDB7P38210 YBR221W-AYBR221W-A 105 nt0.84□□□□□ -2.27
LDB7P38210 SAS3YBL052C 2496 nt0.84□□□□□ -2.28
LDB7P38210 AI5_ALPHAQ0070 1893 nt0.84□□□□□ -2.28
LDB7P38210 SET3YKR029C 2256 nt0.84□□□□□ -2.28
LDB7P38210 RIM20YOR275C 1986 nt0.83□□□□□ -2.28
LDB7P38210 CYC7YEL039C 342 nt0.83□□□□□ -2.28
LDB7P38210 SDH2YLL041C 801 nt0.83□□□□□ -2.28
LDB7P38210 IRC16YPR038W 360 nt0.83□□□□□ -2.28
LDB7P38210 UBP3YER151C 2739 nt0.82□□□□□ -2.28
LDB7P38210 AIM9YER080W 1884 nt0.82□□□□□ -2.28
LDB7P38210 YIL142C-AYIL142C-A 333 nt0.82□□□□□ -2.28
LDB7P38210 YML009C-AYML009C-A 327 nt0.82□□□□□ -2.28
LDB7P38210 SVS1YPL163C 783 nt0.82□□□□□ -2.28
LDB7P38210 ENV11YGR071C 2583 nt0.82□□□□□ -2.28
LDB7P38210 SMC1YFL008W 3678 nt0.8□□□□□ -2.28
LDB7P38210 PXA2YKL188C 2562 nt0.8□□□□□ -2.28
LDB7P38210 YDL206WYDL206W 2289 nt0.8□□□□□ -2.28
LDB7P38210 PDE2YOR360C 1581 nt0.8□□□□□ -2.28
LDB7P38210 YKL068W-AYKL068W-A 237 nt0.8□□□□□ -2.28
LDB7P38210 UPS1YLR193C 528 nt0.8□□□□□ -2.28
LDB7P38210 YOR199WYOR199W 330 nt0.8□□□□□ -2.28
LDB7P38210 MMS4YBR098W 2076 nt0.8□□□□□ -2.28
LDB7P38210 YJR029WYJR029W 5268 nt0.8□□□□□ -2.28
LDB7P38210 YPR137C-BYPR137C-B 5268 nt0.8□□□□□ -2.28
LDB7P38210 SLY1YDR189W 2001 nt0.79□□□□□ -2.28
LDB7P38210 YLL032CYLL032C 2478 nt0.79□□□□□ -2.28
LDB7P38210 YIL059CYIL059C 366 nt0.79□□□□□ -2.28
LDB7P38210 YOR029WYOR029W 336 nt0.79□□□□□ -2.28
LDB7P38210 RCN2YOR220W 798 nt0.79□□□□□ -2.28
LDB7P38210 BUD3YCL014W 4911 nt0.79□□□□□ -2.28
LDB7P38210 FIG4YNL325C 2640 nt0.79□□□□□ -2.28
LDB7P38210 RPS30BYOR182C 192 nt0.78□□□□□ -2.28
LDB7P38210 RFX1YLR176C 2436 nt0.78□□□□□ -2.28
LDB7P38210 STO1YMR125W 2586 nt0.78□□□□□ -2.28
LDB7P38210 COG4YPR105C 2586 nt0.78□□□□□ -2.28
LDB7P38210 snR78snR78 87 nt0.77□□□□□ -2.29
LDB7P38210 MET32YDR253C 576 nt0.77□□□□□ -2.29
LDB7P38210 PAC1YOR269W 1485 nt0.76□□□□□ -2.29
LDB7P38210 YDL016CYDL016C 303 nt0.76□□□□□ -2.29
LDB7P38210 NHP2YDL208W 471 nt0.76□□□□□ -2.29
LDB7P38210 OCA6YDR067C 675 nt0.76□□□□□ -2.29
LDB7P38210 YDR182W-AYDR182W-A 204 nt0.76□□□□□ -2.29
LDB7P38210 YGL239CYGL239C 315 nt0.76□□□□□ -2.29
LDB7P38210 YJR141WYJR141W 1044 nt0.76□□□□□ -2.29
LDB7P38210 RRT1YBL048W 312 nt0.76□□□□□ -2.29
LDB7P38210 LCD1YDR499W 2244 nt0.76□□□□□ -2.29
LDB7P38210 YAP3YHL009C 993 nt0.75□□□□□ -2.29
LDB7P38210 MRPL31YKL138C 396 nt0.75□□□□□ -2.29
LDB7P38210 YDR521WYDR521W 336 nt0.74□□□□□ -2.29
LDB7P38210 YER076W-AYER076W-A 348 nt0.74□□□□□ -2.29
LDB7P38210 YBL029C-AYBL029C-A 285 nt0.74□□□□□ -2.29
LDB7P38210 CMC4YMR194C-B 222 nt0.74□□□□□ -2.29
LDB7P38210 snR13snR13 124 nt0.74□□□□□ -2.29
LDB7P38210 SLI15YBR156C 2097 nt0.74□□□□□ -2.29
LDB7P38210 YDR269CYDR269C 324 nt0.73□□□□□ -2.29
LDB7P38210 NBL1YHR199C-A 222 nt0.73□□□□□ -2.29
LDB7P38210 YNL319WYNL319W 441 nt0.73□□□□□ -2.29
LDB7P38210 RPL32YBL092W 393 nt0.73□□□□□ -2.29
LDB7P38210 OST1YJL002C 1431 nt0.72□□□□□ -2.29
LDB7P38210 MXR1YER042W 555 nt0.72□□□□□ -2.29
LDB7P38210 YFL012WYFL012W 447 nt0.72□□□□□ -2.29
LDB7P38210 HUR1YGL168W 333 nt0.72□□□□□ -2.29
LDB7P38210 YGR025WYGR025W 303 nt0.72□□□□□ -2.29
LDB7P38210 INA22YIR024C 651 nt0.72□□□□□ -2.29
LDB7P38210 SEC1YDR164C 2175 nt0.72□□□□□ -2.29
LDB7P38210 HMLALPHA2YCL067C 633 nt0.71□□□□□ -2.3
LDB7P38210 MATALPHA2YCR039C 633 nt0.71□□□□□ -2.3
LDB7P38210 NPC2YDL046W 522 nt0.71□□□□□ -2.3
LDB7P38210 YDL196WYDL196W 330 nt0.71□□□□□ -2.3
LDB7P38210 YER023C-AYER023C-A 213 nt0.71□□□□□ -2.3
LDB7P38210 tT(AGU)BtT(AGU)B 73 nt0.71□□□□□ -2.3
LDB7P38210 tT(AGU)CtT(AGU)C 73 nt0.71□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms