Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX11P35716 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX11P35716 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SOX11P35716 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX11P35716 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX11P35716 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.63■□□□□ 0.73
SOX11P35716 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.63■□□□□ 0.73
SOX11P35716 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.63■□□□□ 0.73
SOX11P35716 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SOX11P35716 AC005181.1-201ENST00000604782 1256 ntBASIC19.63■□□□□ 0.73
SOX11P35716 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.63■□□□□ 0.73
SOX11P35716 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.63■□□□□ 0.73
SOX11P35716 AC020907.5-201ENST00000624372 1936 ntBASIC19.63■□□□□ 0.73
SOX11P35716 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX11P35716 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SOX11P35716 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX11P35716 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SOX11P35716 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.62■□□□□ 0.73
SOX11P35716 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX11P35716 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX11P35716 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.62■□□□□ 0.73
SOX11P35716 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.62■□□□□ 0.73
SOX11P35716 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX11P35716 AL355802.2-201ENST00000402069 882 ntBASIC19.62■□□□□ 0.73
SOX11P35716 CNN2P6-201ENST00000439038 900 ntBASIC19.62■□□□□ 0.73
SOX11P35716 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.62■□□□□ 0.73
SOX11P35716 SLC7A5P1-201ENST00000568957 537 ntBASIC19.62■□□□□ 0.73
SOX11P35716 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.62■□□□□ 0.73
SOX11P35716 AL121832.2-201ENST00000610979 668 ntBASIC19.62■□□□□ 0.73
SOX11P35716 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SOX11P35716 AL512408.1-201ENST00000569378 2000 ntBASIC19.62■□□□□ 0.73
SOX11P35716 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.62■□□□□ 0.73
SOX11P35716 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX11P35716 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SOX11P35716 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX11P35716 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX11P35716 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX11P35716 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.62■□□□□ 0.73
SOX11P35716 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.62■□□□□ 0.73
SOX11P35716 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.61■□□□□ 0.73
SOX11P35716 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.61■□□□□ 0.73
SOX11P35716 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX11P35716 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX11P35716 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
SOX11P35716 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.61■□□□□ 0.73
SOX11P35716 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.61■□□□□ 0.73
SOX11P35716 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.61■□□□□ 0.73
SOX11P35716 AC010536.3-201ENST00000620306 533 ntBASIC19.61■□□□□ 0.73
SOX11P35716 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX11P35716 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SOX11P35716 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX11P35716 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.61■□□□□ 0.73
SOX11P35716 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SOX11P35716 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX11P35716 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.6■□□□□ 0.73
SOX11P35716 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SOX11P35716 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SOX11P35716 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.6■□□□□ 0.73
SOX11P35716 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.6■□□□□ 0.73
SOX11P35716 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SOX11P35716 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.6■□□□□ 0.73
SOX11P35716 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.6■□□□□ 0.73
SOX11P35716 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SOX11P35716 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SOX11P35716 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SOX11P35716 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SOX11P35716 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SOX11P35716 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SOX11P35716 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SOX11P35716 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SOX11P35716 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
SOX11P35716 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SOX11P35716 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SOX11P35716 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SOX11P35716 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SOX11P35716 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SOX11P35716 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SOX11P35716 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SOX11P35716 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SOX11P35716 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SOX11P35716 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.59■□□□□ 0.73
SOX11P35716 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SOX11P35716 GUSBP6-202ENST00000438529 1198 ntBASIC19.59■□□□□ 0.73
SOX11P35716 SLC7A5P2-201ENST00000553010 536 ntBASIC19.59■□□□□ 0.73
SOX11P35716 AC142086.2-201ENST00000569753 217 ntBASIC19.59■□□□□ 0.73
SOX11P35716 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SOX11P35716 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.59■□□□□ 0.73
SOX11P35716 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.59■□□□□ 0.73
SOX11P35716 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.59■□□□□ 0.73
SOX11P35716 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
SOX11P35716 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.59■□□□□ 0.73
SOX11P35716 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
SOX11P35716 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SOX11P35716 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SOX11P35716 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SOX11P35716 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.59■□□□□ 0.73
SOX11P35716 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SOX11P35716 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SOX11P35716 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SOX11P35716 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms