Protein–RNA interactions for Protein: P23394

PRP28, Pre-mRNA-splicing ATP-dependent RNA helicase PRP28, yeastyeast

Predictions only

Length 588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP28P23394 SET2YJL168C 2202 nt2.3□□□□□ -2.04
PRP28P23394 UBR1YGR184C 5853 nt2.3□□□□□ -2.04
PRP28P23394 PDR11YIL013C 4236 nt2.3□□□□□ -2.04
PRP28P23394 tW(CCA)G1tW(CCA)G1 72 nt2.3□□□□□ -2.04
PRP28P23394 tW(CCA)G2tW(CCA)G2 72 nt2.3□□□□□ -2.04
PRP28P23394 tW(CCA)JtW(CCA)J 72 nt2.3□□□□□ -2.04
PRP28P23394 tW(CCA)KtW(CCA)K 72 nt2.3□□□□□ -2.04
PRP28P23394 tW(CCA)MtW(CCA)M 72 nt2.3□□□□□ -2.04
PRP28P23394 tW(CCA)PtW(CCA)P 72 nt2.3□□□□□ -2.04
PRP28P23394 INA22YIR024C 651 nt2.3□□□□□ -2.04
PRP28P23394 YLR120W-AYLR120W-A 102 nt2.3□□□□□ -2.04
PRP28P23394 YMR321CYMR321C 318 nt2.3□□□□□ -2.04
PRP28P23394 LCD1YDR499W 2244 nt2.3□□□□□ -2.04
PRP28P23394 CDC53YDL132W 2448 nt2.3□□□□□ -2.04
PRP28P23394 PLC1YPL268W 2610 nt2.3□□□□□ -2.04
PRP28P23394 PDR1YGL013C 3207 nt2.29□□□□□ -2.04
PRP28P23394 RPH1YER169W 2391 nt2.29□□□□□ -2.04
PRP28P23394 YJL182CYJL182C 318 nt2.29□□□□□ -2.04
PRP28P23394 VIK1YPL253C 1944 nt2.29□□□□□ -2.04
PRP28P23394 BNI1YNL271C 5862 nt2.28□□□□□ -2.04
PRP28P23394 INP2YMR163C 2118 nt2.28□□□□□ -2.04
PRP28P23394 YOR011W-AYOR011W-A 207 nt2.28□□□□□ -2.04
PRP28P23394 PTP3YER075C 2787 nt2.27□□□□□ -2.05
PRP28P23394 YDR286CYDR286C 345 nt2.27□□□□□ -2.05
PRP28P23394 tF(GAA)QtF(GAA)Q 75 nt2.27□□□□□ -2.05
PRP28P23394 YLR466C-BYLR466C-B 117 nt2.27□□□□□ -2.05
PRP28P23394 SKP2YNL311C 2292 nt2.27□□□□□ -2.05
PRP28P23394 SLM1YIL105C 2061 nt2.27□□□□□ -2.05
PRP28P23394 MUK1YPL070W 1839 nt2.26□□□□□ -2.05
PRP28P23394 SWI5YDR146C 2130 nt2.26□□□□□ -2.05
PRP28P23394 snR72snR72 98 nt2.26□□□□□ -2.05
PRP28P23394 YHR032W-AYHR032W-A 180 nt2.26□□□□□ -2.05
PRP28P23394 YOR055WYOR055W 435 nt2.26□□□□□ -2.05
PRP28P23394 MET18YIL128W 3099 nt2.26□□□□□ -2.05
PRP28P23394 SWI6YLR182W 2412 nt2.26□□□□□ -2.05
PRP28P23394 SPT21YMR179W 2277 nt2.25□□□□□ -2.05
PRP28P23394 YGR151CYGR151C 336 nt2.25□□□□□ -2.05
PRP28P23394 YMR230W-AYMR230W-A 189 nt2.25□□□□□ -2.05
PRP28P23394 RPB10YOR210W 213 nt2.25□□□□□ -2.05
PRP28P23394 CLN3YAL040C 1743 nt2.25□□□□□ -2.05
PRP28P23394 GIP3YPL137C 3831 nt2.25□□□□□ -2.05
PRP28P23394 SIR4YDR227W 4077 nt2.25□□□□□ -2.05
PRP28P23394 SVL3YPL032C 2478 nt2.25□□□□□ -2.05
PRP28P23394 PDE2YOR360C 1581 nt2.24□□□□□ -2.05
PRP28P23394 YCR043CYCR043C 384 nt2.24□□□□□ -2.05
PRP28P23394 snR70snR70 164 nt2.24□□□□□ -2.05
PRP28P23394 YDL185C-AYDL185C-A 228 nt2.24□□□□□ -2.05
PRP28P23394 YHR073W-AYHR073W-A 177 nt2.24□□□□□ -2.05
PRP28P23394 PAU18YLL064C 363 nt2.24□□□□□ -2.05
PRP28P23394 PAU6YNR076W 363 nt2.24□□□□□ -2.05
PRP28P23394 RFX1YLR176C 2436 nt2.24□□□□□ -2.05
PRP28P23394 IRR1YIL026C 3453 nt2.23□□□□□ -2.05
PRP28P23394 RGA1YOR127W 3024 nt2.23□□□□□ -2.05
PRP28P23394 MPT5YGL178W 2580 nt2.23□□□□□ -2.05
PRP28P23394 snR43snR43 209 nt2.23□□□□□ -2.05
PRP28P23394 VPS13YLL040C 9435 nt2.23□□□□□ -2.05
PRP28P23394 IST2YBR086C 2841 nt2.23□□□□□ -2.05
PRP28P23394 AI5_ALPHAQ0070 1893 nt2.22□□□□□ -2.05
PRP28P23394 USO1YDL058W 5373 nt2.22□□□□□ -2.05
PRP28P23394 YCL046WYCL046W 324 nt2.22□□□□□ -2.05
PRP28P23394 NEW1YPL226W 3591 nt2.22□□□□□ -2.05
PRP28P23394 LYS14YDR034C 2373 nt2.21□□□□□ -2.06
PRP28P23394 DNA2YHR164C 4569 nt2.21□□□□□ -2.06
PRP28P23394 PHO91YNR013C 2685 nt2.21□□□□□ -2.06
PRP28P23394 VTC3YPL019C 2508 nt2.21□□□□□ -2.06
PRP28P23394 ZRG8YER033C 3231 nt2.21□□□□□ -2.06
PRP28P23394 STH1YIL126W 4080 nt2.21□□□□□ -2.06
PRP28P23394 SEC16YPL085W 6588 nt2.2□□□□□ -2.06
PRP28P23394 SCD5YOR329C 2619 nt2.2□□□□□ -2.06
PRP28P23394 CHC1YGL206C 4962 nt2.2□□□□□ -2.06
PRP28P23394 VPS54YDR027C 2670 nt2.2□□□□□ -2.06
PRP28P23394 SAP185YJL098W 3177 nt2.19□□□□□ -2.06
PRP28P23394 PDR3YBL005W 2931 nt2.19□□□□□ -2.06
PRP28P23394 YHR071C-AYHR071C-A 321 nt2.19□□□□□ -2.06
PRP28P23394 YOL160WYOL160W 342 nt2.19□□□□□ -2.06
PRP28P23394 YOR343W-BYOR343W-B 5313 nt2.19□□□□□ -2.06
PRP28P23394 SGS1YMR190C 4344 nt2.18□□□□□ -2.06
PRP28P23394 YOL098CYOL098C 3114 nt2.18□□□□□ -2.06
PRP28P23394 MNE1YOR350C 1992 nt2.18□□□□□ -2.06
PRP28P23394 STE11YLR362W 2154 nt2.18□□□□□ -2.06
PRP28P23394 EMP24YGL200C 612 nt2.18□□□□□ -2.06
PRP28P23394 YPR092WYPR092W 306 nt2.18□□□□□ -2.06
PRP28P23394 SCP160YJL080C 3669 nt2.18□□□□□ -2.06
PRP28P23394 SLY1YDR189W 2001 nt2.18□□□□□ -2.06
PRP28P23394 RTT107YHR154W 3213 nt2.17□□□□□ -2.06
PRP28P23394 YIL156W-BYIL156W-B 222 nt2.17□□□□□ -2.06
PRP28P23394 SSD1YDR293C 3753 nt2.17□□□□□ -2.06
PRP28P23394 SMC6YLR383W 3345 nt2.17□□□□□ -2.06
PRP28P23394 SPC98YNL126W 2541 nt2.16□□□□□ -2.06
PRP28P23394 snR74snR74 88 nt2.16□□□□□ -2.06
PRP28P23394 YDR003W-AYDR003W-A 123 nt2.16□□□□□ -2.06
PRP28P23394 Q0092Q0092 141 nt2.16□□□□□ -2.06
PRP28P23394 YJL150WYJL150W 303 nt2.16□□□□□ -2.06
PRP28P23394 YNL338WYNL338W 159 nt2.16□□□□□ -2.06
PRP28P23394 NIP100YPL174C 2607 nt2.15□□□□□ -2.06
PRP28P23394 RTT101YJL047C 2529 nt2.15□□□□□ -2.07
PRP28P23394 YER088C-AYER088C-A 324 nt2.15□□□□□ -2.07
PRP28P23394 VPS55YJR044C 423 nt2.15□□□□□ -2.07
PRP28P23394 RRT15YLR162W-A 189 nt2.15□□□□□ -2.07
PRP28P23394 VPS8YAL002W 3825 nt2.15□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 34.3 ms