Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH3P22223 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.7■□□□□ 0.74
CDH3P22223 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH3P22223 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDH3P22223 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.69■□□□□ 0.74
CDH3P22223 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH3P22223 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH3P22223 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH3P22223 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH3P22223 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH3P22223 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH3P22223 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH3P22223 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH3P22223 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH3P22223 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.69■□□□□ 0.74
CDH3P22223 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH3P22223 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.69■□□□□ 0.74
CDH3P22223 AC105020.6-201ENST00000621523 1217 ntBASIC19.69■□□□□ 0.74
CDH3P22223 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDH3P22223 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH3P22223 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH3P22223 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 AC087633.2-202ENST00000565166 1439 ntBASIC19.68■□□□□ 0.74
CDH3P22223 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 FEM1AP4-201ENST00000443167 1987 ntBASIC19.68■□□□□ 0.74
CDH3P22223 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH3P22223 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CDH3P22223 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH3P22223 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH3P22223 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 TSPY20P-201ENST00000450910 630 ntBASIC19.68■□□□□ 0.74
CDH3P22223 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH3P22223 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDH3P22223 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CDH3P22223 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH3P22223 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH3P22223 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CDH3P22223 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CDH3P22223 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CDH3P22223 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CDH3P22223 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH3P22223 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH3P22223 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH3P22223 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
CDH3P22223 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH3P22223 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CDH3P22223 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH3P22223 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH3P22223 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH3P22223 ABHD17AP1-201ENST00000358206 933 ntBASIC19.67■□□□□ 0.74
CDH3P22223 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH3P22223 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.67■□□□□ 0.74
CDH3P22223 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.67■□□□□ 0.74
CDH3P22223 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.67■□□□□ 0.74
CDH3P22223 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH3P22223 MIR4651-201ENST00000582622 73 ntBASIC19.67■□□□□ 0.74
CDH3P22223 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH3P22223 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
CDH3P22223 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CDH3P22223 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH3P22223 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH3P22223 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH3P22223 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH3P22223 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH3P22223 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH3P22223 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH3P22223 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH3P22223 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.66■□□□□ 0.74
CDH3P22223 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH3P22223 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH3P22223 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH3P22223 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH3P22223 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.66■□□□□ 0.74
CDH3P22223 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
CDH3P22223 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH3P22223 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.66■□□□□ 0.74
CDH3P22223 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH3P22223 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH3P22223 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH3P22223 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms