Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TPRP12270 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPRP12270 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TPRP12270 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.02■□□□□ 0.64
TPRP12270 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TPRP12270 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TPRP12270 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.02■□□□□ 0.64
TPRP12270 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TPRP12270 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.02■□□□□ 0.64
TPRP12270 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.02■□□□□ 0.64
TPRP12270 IFNL4P1-201ENST00000607083 540 ntBASIC19.02■□□□□ 0.64
TPRP12270 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.02■□□□□ 0.64
TPRP12270 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPRP12270 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPRP12270 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
TPRP12270 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPRP12270 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPRP12270 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.01■□□□□ 0.63
TPRP12270 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TPRP12270 AL031985.4-201ENST00000642138 673 ntBASIC19.01■□□□□ 0.63
TPRP12270 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TPRP12270 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.01■□□□□ 0.63
TPRP12270 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPRP12270 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPRP12270 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.01■□□□□ 0.63
TPRP12270 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPRP12270 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.01■□□□□ 0.63
TPRP12270 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.01■□□□□ 0.63
TPRP12270 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.01■□□□□ 0.63
TPRP12270 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.01■□□□□ 0.63
TPRP12270 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TPRP12270 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
TPRP12270 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPRP12270 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPRP12270 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TPRP12270 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TPRP12270 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.01■□□□□ 0.63
TPRP12270 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.01■□□□□ 0.63
TPRP12270 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPRP12270 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19■□□□□ 0.63
TPRP12270 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19■□□□□ 0.63
TPRP12270 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19■□□□□ 0.63
TPRP12270 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPRP12270 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TPRP12270 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPRP12270 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19■□□□□ 0.63
TPRP12270 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPRP12270 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19■□□□□ 0.63
TPRP12270 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19■□□□□ 0.63
TPRP12270 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19■□□□□ 0.63
TPRP12270 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19■□□□□ 0.63
TPRP12270 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPRP12270 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPRP12270 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TPRP12270 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.99■□□□□ 0.63
TPRP12270 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TPRP12270 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.99■□□□□ 0.63
TPRP12270 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.99■□□□□ 0.63
TPRP12270 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.99■□□□□ 0.63
TPRP12270 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPRP12270 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TPRP12270 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TPRP12270 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.99■□□□□ 0.63
TPRP12270 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.99■□□□□ 0.63
TPRP12270 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.99■□□□□ 0.63
TPRP12270 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.99■□□□□ 0.63
TPRP12270 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.99■□□□□ 0.63
TPRP12270 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TPRP12270 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPRP12270 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPRP12270 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPRP12270 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TPRP12270 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPRP12270 AL136038.3-201ENST00000561909 1096 ntBASIC18.99■□□□□ 0.63
TPRP12270 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.99■□□□□ 0.63
TPRP12270 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
TPRP12270 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TPRP12270 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TPRP12270 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPRP12270 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPRP12270 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPRP12270 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPRP12270 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPRP12270 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPRP12270 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.98■□□□□ 0.63
TPRP12270 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPRP12270 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.98■□□□□ 0.63
TPRP12270 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.98■□□□□ 0.63
TPRP12270 AC104692.2-201ENST00000603054 253 ntBASIC18.98■□□□□ 0.63
TPRP12270 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPRP12270 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TPRP12270 MESTP1-201ENST00000404287 994 ntBASIC18.98■□□□□ 0.63
TPRP12270 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TPRP12270 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPRP12270 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPRP12270 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPRP12270 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.98■□□□□ 0.63
TPRP12270 CYP21A1P-202ENST00000354927 1481 ntBASIC18.98■□□□□ 0.63
TPRP12270 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPRP12270 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms