Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
APOA1P02647 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
APOA1P02647 AL158211.5-201ENST00000623583 2518 ntBASIC17.98■□□□□ 0.47
APOA1P02647 TCF3P1-201ENST00000423021 1937 ntBASIC17.98■□□□□ 0.47
APOA1P02647 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
APOA1P02647 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
APOA1P02647 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
APOA1P02647 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
APOA1P02647 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
APOA1P02647 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.97■□□□□ 0.47
APOA1P02647 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
APOA1P02647 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.97■□□□□ 0.47
APOA1P02647 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APOA1P02647 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APOA1P02647 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
APOA1P02647 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
APOA1P02647 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
APOA1P02647 AC092028.1-203ENST00000608262 953 ntBASIC17.97■□□□□ 0.47
APOA1P02647 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
APOA1P02647 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APOA1P02647 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
APOA1P02647 AC093503.3-201ENST00000624917 2352 ntBASIC17.97■□□□□ 0.47
APOA1P02647 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
APOA1P02647 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.97■□□□□ 0.47
APOA1P02647 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
APOA1P02647 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOA1P02647 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.96■□□□□ 0.47
APOA1P02647 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
APOA1P02647 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
APOA1P02647 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.96■□□□□ 0.47
APOA1P02647 AC005332.7-201ENST00000614046 2005 ntBASIC17.96■□□□□ 0.47
APOA1P02647 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOA1P02647 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
APOA1P02647 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.96■□□□□ 0.47
APOA1P02647 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOA1P02647 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOA1P02647 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
APOA1P02647 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
APOA1P02647 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.96■□□□□ 0.47
APOA1P02647 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOA1P02647 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.96■□□□□ 0.47
APOA1P02647 HSD17B1P1-201ENST00000590052 955 ntBASIC17.96■□□□□ 0.47
APOA1P02647 AL031848.2-201ENST00000607670 837 ntBASIC17.96■□□□□ 0.47
APOA1P02647 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.96■□□□□ 0.47
APOA1P02647 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOA1P02647 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOA1P02647 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOA1P02647 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOA1P02647 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
APOA1P02647 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.96■□□□□ 0.47
APOA1P02647 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.96■□□□□ 0.46
APOA1P02647 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
APOA1P02647 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.95■□□□□ 0.46
APOA1P02647 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOA1P02647 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.95■□□□□ 0.46
APOA1P02647 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOA1P02647 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOA1P02647 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
APOA1P02647 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
APOA1P02647 OR2I1P-207ENST00000453522 948 ntBASIC17.95■□□□□ 0.46
APOA1P02647 MTDHP2-201ENST00000601468 714 ntBASIC17.95■□□□□ 0.46
APOA1P02647 pRNA.6-201ENST00000610482 90 ntBASIC17.95■□□□□ 0.46
APOA1P02647 pRNA.5-201ENST00000612139 90 ntBASIC17.95■□□□□ 0.46
APOA1P02647 pRNA.11-201ENST00000618423 90 ntBASIC17.95■□□□□ 0.46
APOA1P02647 pRNA.13-201ENST00000619112 90 ntBASIC17.95■□□□□ 0.46
APOA1P02647 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.95■□□□□ 0.46
APOA1P02647 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APOA1P02647 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.95■□□□□ 0.46
APOA1P02647 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOA1P02647 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOA1P02647 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.95■□□□□ 0.46
APOA1P02647 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
APOA1P02647 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOA1P02647 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.94■□□□□ 0.46
APOA1P02647 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOA1P02647 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
APOA1P02647 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOA1P02647 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
APOA1P02647 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
APOA1P02647 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOA1P02647 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.94■□□□□ 0.46
APOA1P02647 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOA1P02647 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.94■□□□□ 0.46
APOA1P02647 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
APOA1P02647 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.94■□□□□ 0.46
APOA1P02647 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOA1P02647 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOA1P02647 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOA1P02647 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
APOA1P02647 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOA1P02647 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOA1P02647 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.93■□□□□ 0.46
APOA1P02647 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOA1P02647 AP006587.3-201ENST00000525742 1516 ntBASIC17.93■□□□□ 0.46
APOA1P02647 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.93■□□□□ 0.46
APOA1P02647 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
APOA1P02647 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOA1P02647 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOA1P02647 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
APOA1P02647 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms