Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AC092118.2-201ENST00000613495 667 ntBASIC20.98■□□□□ 0.95
OPHN1O60890 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.98■□□□□ 0.95
OPHN1O60890 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.98■□□□□ 0.95
OPHN1O60890 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.98■□□□□ 0.95
OPHN1O60890 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.98■□□□□ 0.95
OPHN1O60890 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.98■□□□□ 0.95
OPHN1O60890 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
OPHN1O60890 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.98■□□□□ 0.95
OPHN1O60890 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
OPHN1O60890 AC020907.5-201ENST00000624372 1936 ntBASIC20.98■□□□□ 0.95
OPHN1O60890 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.98■□□□□ 0.95
OPHN1O60890 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
OPHN1O60890 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
OPHN1O60890 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.97■□□□□ 0.95
OPHN1O60890 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
OPHN1O60890 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
OPHN1O60890 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.97■□□□□ 0.95
OPHN1O60890 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.97■□□□□ 0.95
OPHN1O60890 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
OPHN1O60890 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.97■□□□□ 0.95
OPHN1O60890 RARRES2P4-201ENST00000514074 484 ntBASIC20.97■□□□□ 0.95
OPHN1O60890 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.97■□□□□ 0.95
OPHN1O60890 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
OPHN1O60890 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.97■□□□□ 0.95
OPHN1O60890 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
OPHN1O60890 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.97■□□□□ 0.95
OPHN1O60890 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
OPHN1O60890 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
OPHN1O60890 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.97■□□□□ 0.95
OPHN1O60890 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
OPHN1O60890 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
OPHN1O60890 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
OPHN1O60890 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
OPHN1O60890 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
OPHN1O60890 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
OPHN1O60890 AC091799.1-201ENST00000422823 811 ntBASIC20.96■□□□□ 0.95
OPHN1O60890 DUSP5P2-201ENST00000426873 1033 ntBASIC20.96■□□□□ 0.95
OPHN1O60890 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.96■□□□□ 0.95
OPHN1O60890 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.96■□□□□ 0.95
OPHN1O60890 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.96■□□□□ 0.95
OPHN1O60890 AC007322.4-201ENST00000509611 723 ntBASIC20.96■□□□□ 0.95
OPHN1O60890 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.96■□□□□ 0.95
OPHN1O60890 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.96■□□□□ 0.95
OPHN1O60890 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.96■□□□□ 0.95
OPHN1O60890 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
OPHN1O60890 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
OPHN1O60890 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
OPHN1O60890 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
OPHN1O60890 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
OPHN1O60890 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
OPHN1O60890 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
OPHN1O60890 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.95■□□□□ 0.94
OPHN1O60890 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
OPHN1O60890 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
OPHN1O60890 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
OPHN1O60890 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
OPHN1O60890 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
OPHN1O60890 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
OPHN1O60890 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.95■□□□□ 0.94
OPHN1O60890 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.95■□□□□ 0.94
OPHN1O60890 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.95■□□□□ 0.94
OPHN1O60890 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.95■□□□□ 0.94
OPHN1O60890 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.95■□□□□ 0.94
OPHN1O60890 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
OPHN1O60890 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
OPHN1O60890 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.95■□□□□ 0.94
OPHN1O60890 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
OPHN1O60890 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
OPHN1O60890 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
OPHN1O60890 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
OPHN1O60890 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
OPHN1O60890 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
OPHN1O60890 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.94■□□□□ 0.94
OPHN1O60890 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.94■□□□□ 0.94
OPHN1O60890 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
OPHN1O60890 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
OPHN1O60890 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.94■□□□□ 0.94
OPHN1O60890 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
OPHN1O60890 AL512625.2-201ENST00000417533 625 ntBASIC20.94■□□□□ 0.94
OPHN1O60890 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
OPHN1O60890 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
OPHN1O60890 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
OPHN1O60890 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
OPHN1O60890 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
OPHN1O60890 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
OPHN1O60890 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
OPHN1O60890 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.94■□□□□ 0.94
OPHN1O60890 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
OPHN1O60890 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
OPHN1O60890 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
OPHN1O60890 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
OPHN1O60890 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
OPHN1O60890 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
OPHN1O60890 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
OPHN1O60890 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
OPHN1O60890 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
OPHN1O60890 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
OPHN1O60890 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
OPHN1O60890 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
OPHN1O60890 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms