Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
CCNT1O60563 LINC01521-201ENST00000504184 1943 ntBASIC22.94■■□□□ 1.26
CCNT1O60563 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.94■■□□□ 1.26
CCNT1O60563 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.94■■□□□ 1.26
CCNT1O60563 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.94■■□□□ 1.26
CCNT1O60563 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CCNT1O60563 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CCNT1O60563 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
CCNT1O60563 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CCNT1O60563 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CCNT1O60563 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.93■■□□□ 1.26
CCNT1O60563 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CCNT1O60563 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.93■■□□□ 1.26
CCNT1O60563 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CCNT1O60563 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CCNT1O60563 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
CCNT1O60563 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
CCNT1O60563 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CCNT1O60563 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CCNT1O60563 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.93■■□□□ 1.26
CCNT1O60563 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CCNT1O60563 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.92■■□□□ 1.26
CCNT1O60563 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
CCNT1O60563 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCNT1O60563 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCNT1O60563 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
CCNT1O60563 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCNT1O60563 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCNT1O60563 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.92■■□□□ 1.26
CCNT1O60563 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
CCNT1O60563 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.92■■□□□ 1.26
CCNT1O60563 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.92■■□□□ 1.26
CCNT1O60563 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
CCNT1O60563 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.92■■□□□ 1.26
CCNT1O60563 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
CCNT1O60563 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCNT1O60563 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCNT1O60563 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.91■■□□□ 1.26
CCNT1O60563 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
CCNT1O60563 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCNT1O60563 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCNT1O60563 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.91■■□□□ 1.26
CCNT1O60563 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CCNT1O60563 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CCNT1O60563 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.91■■□□□ 1.26
CCNT1O60563 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CCNT1O60563 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.91■■□□□ 1.26
CCNT1O60563 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CCNT1O60563 AC083880.1-201ENST00000608266 535 ntBASIC22.91■■□□□ 1.26
CCNT1O60563 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.91■■□□□ 1.26
CCNT1O60563 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
CCNT1O60563 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCNT1O60563 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CCNT1O60563 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.9■■□□□ 1.26
CCNT1O60563 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CCNT1O60563 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCNT1O60563 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCNT1O60563 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
CCNT1O60563 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.9■■□□□ 1.26
CCNT1O60563 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
CCNT1O60563 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.9■■□□□ 1.26
CCNT1O60563 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.9■■□□□ 1.26
CCNT1O60563 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
CCNT1O60563 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.9■■□□□ 1.26
CCNT1O60563 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.89■■□□□ 1.26
CCNT1O60563 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
CCNT1O60563 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CCNT1O60563 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.89■■□□□ 1.25
CCNT1O60563 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CCNT1O60563 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CCNT1O60563 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CCNT1O60563 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CCNT1O60563 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CCNT1O60563 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CCNT1O60563 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
CCNT1O60563 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CCNT1O60563 PTBP1P-201ENST00000554374 1601 ntBASIC22.89■■□□□ 1.25
CCNT1O60563 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CCNT1O60563 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.89■■□□□ 1.25
CCNT1O60563 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCNT1O60563 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCNT1O60563 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CCNT1O60563 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.88■■□□□ 1.25
CCNT1O60563 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.88■■□□□ 1.25
CCNT1O60563 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCNT1O60563 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
CCNT1O60563 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
CCNT1O60563 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCNT1O60563 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCNT1O60563 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.88■■□□□ 1.25
CCNT1O60563 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCNT1O60563 AL162377.1-201ENST00000618844 1793 ntBASIC22.88■■□□□ 1.25
CCNT1O60563 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCNT1O60563 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
CCNT1O60563 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CCNT1O60563 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCNT1O60563 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCNT1O60563 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CCNT1O60563 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
CCNT1O60563 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms