Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX3O60493 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX3O60493 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX3O60493 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SNX3O60493 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX3O60493 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
SNX3O60493 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX3O60493 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX3O60493 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SNX3O60493 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX3O60493 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SNX3O60493 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SNX3O60493 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX3O60493 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SNX3O60493 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX3O60493 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX3O60493 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX3O60493 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX3O60493 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX3O60493 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX3O60493 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.86■□□□□ 0.77
SNX3O60493 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX3O60493 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX3O60493 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNX3O60493 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNX3O60493 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX3O60493 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX3O60493 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX3O60493 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.85■□□□□ 0.77
SNX3O60493 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNX3O60493 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX3O60493 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SNX3O60493 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SNX3O60493 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.85■□□□□ 0.77
SNX3O60493 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX3O60493 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX3O60493 AL032819.2-201ENST00000624543 2162 ntBASIC19.85■□□□□ 0.77
SNX3O60493 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
SNX3O60493 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX3O60493 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX3O60493 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX3O60493 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX3O60493 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX3O60493 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX3O60493 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNX3O60493 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
SNX3O60493 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNX3O60493 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNX3O60493 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNX3O60493 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX3O60493 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX3O60493 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNX3O60493 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.84■□□□□ 0.77
SNX3O60493 AC239859.2-201ENST00000444165 318 ntBASIC19.84■□□□□ 0.77
SNX3O60493 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SNX3O60493 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNX3O60493 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX3O60493 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNX3O60493 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.84■□□□□ 0.77
SNX3O60493 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX3O60493 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
SNX3O60493 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX3O60493 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SNX3O60493 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SNX3O60493 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SNX3O60493 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.84■□□□□ 0.77
SNX3O60493 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SNX3O60493 DPP3P2-201ENST00000416030 1696 ntBASIC19.84■□□□□ 0.77
SNX3O60493 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
SNX3O60493 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX3O60493 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
SNX3O60493 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.83■□□□□ 0.77
SNX3O60493 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX3O60493 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SNX3O60493 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.83■□□□□ 0.77
SNX3O60493 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX3O60493 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
SNX3O60493 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.83■□□□□ 0.77
SNX3O60493 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.83■□□□□ 0.76
SNX3O60493 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
SNX3O60493 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX3O60493 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX3O60493 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX3O60493 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX3O60493 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX3O60493 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX3O60493 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.83■□□□□ 0.76
SNX3O60493 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX3O60493 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX3O60493 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX3O60493 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX3O60493 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNX3O60493 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX3O60493 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.82■□□□□ 0.76
SNX3O60493 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX3O60493 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX3O60493 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX3O60493 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX3O60493 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.82■□□□□ 0.76
SNX3O60493 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms