Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA12O60330 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA12O60330 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA12O60330 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA12O60330 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA12O60330 AC005829.2-201ENST00000571422 1056 ntBASIC20.01■□□□□ 0.79
PCDHGA12O60330 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
PCDHGA12O60330 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDHGA12O60330 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDHGA12O60330 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.01■□□□□ 0.79
PCDHGA12O60330 AL049637.2-201ENST00000641778 930 ntBASIC20.01■□□□□ 0.79
PCDHGA12O60330 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PCDHGA12O60330 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA12O60330 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGA12O60330 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA12O60330 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA12O60330 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA12O60330 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA12O60330 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGA12O60330 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA12O60330 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA12O60330 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA12O60330 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA12O60330 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PCDHGA12O60330 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PCDHGA12O60330 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20■□□□□ 0.79
PCDHGA12O60330 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PCDHGA12O60330 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA12O60330 AC239809.2-201ENST00000415381 517 ntBASIC20■□□□□ 0.79
PCDHGA12O60330 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PCDHGA12O60330 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20■□□□□ 0.79
PCDHGA12O60330 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20■□□□□ 0.79
PCDHGA12O60330 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20■□□□□ 0.79
PCDHGA12O60330 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20■□□□□ 0.79
PCDHGA12O60330 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20■□□□□ 0.79
PCDHGA12O60330 AC110285.5-201ENST00000611501 352 ntBASIC20■□□□□ 0.79
PCDHGA12O60330 AL023875.1-201ENST00000640777 796 ntBASIC20■□□□□ 0.79
PCDHGA12O60330 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA12O60330 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA12O60330 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PCDHGA12O60330 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20■□□□□ 0.79
PCDHGA12O60330 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20■□□□□ 0.79
PCDHGA12O60330 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA12O60330 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA12O60330 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA12O60330 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PCDHGA12O60330 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHGA12O60330 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDHGA12O60330 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA12O60330 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHGA12O60330 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA12O60330 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA12O60330 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA12O60330 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA12O60330 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA12O60330 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PCDHGA12O60330 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHGA12O60330 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PCDHGA12O60330 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA12O60330 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHGA12O60330 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PCDHGA12O60330 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA12O60330 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA12O60330 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHGA12O60330 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA12O60330 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA12O60330 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PCDHGA12O60330 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA12O60330 TSPY7P-201ENST00000431358 1114 ntBASIC19.98■□□□□ 0.79
PCDHGA12O60330 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA12O60330 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.98■□□□□ 0.79
PCDHGA12O60330 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
PCDHGA12O60330 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA12O60330 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDHGA12O60330 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.98■□□□□ 0.79
PCDHGA12O60330 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHGA12O60330 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHGA12O60330 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PCDHGA12O60330 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHGA12O60330 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA12O60330 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHGA12O60330 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
PCDHGA12O60330 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA12O60330 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA12O60330 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA12O60330 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA12O60330 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA12O60330 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA12O60330 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA12O60330 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHGA12O60330 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA12O60330 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA12O60330 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHGA12O60330 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHGA12O60330 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHGA12O60330 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.97■□□□□ 0.79
PCDHGA12O60330 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHGA12O60330 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.97■□□□□ 0.79
PCDHGA12O60330 MIR4785-201ENST00000585005 73 ntBASIC19.97■□□□□ 0.79
PCDHGA12O60330 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms