Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF13O43567 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF13O43567 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
RNF13O43567 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF13O43567 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF13O43567 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RNF13O43567 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.34■□□□□ 0.53
RNF13O43567 MIR5787-201ENST00000611784 55 ntBASIC18.34■□□□□ 0.53
RNF13O43567 MIR2861-201ENST00000636310 90 ntBASIC18.34■□□□□ 0.53
RNF13O43567 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RNF13O43567 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
RNF13O43567 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF13O43567 AC092720.2-201ENST00000602388 1665 ntBASIC18.34■□□□□ 0.53
RNF13O43567 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RNF13O43567 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RNF13O43567 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
RNF13O43567 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RNF13O43567 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
RNF13O43567 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF13O43567 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
RNF13O43567 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF13O43567 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF13O43567 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF13O43567 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF13O43567 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF13O43567 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF13O43567 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF13O43567 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF13O43567 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF13O43567 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF13O43567 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF13O43567 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF13O43567 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF13O43567 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF13O43567 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RNF13O43567 AC099778.1-201ENST00000568593 1911 ntBASIC18.32■□□□□ 0.52
RNF13O43567 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF13O43567 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF13O43567 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RNF13O43567 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF13O43567 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.32■□□□□ 0.52
RNF13O43567 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.32■□□□□ 0.52
RNF13O43567 FAM21FP-204ENST00000608637 956 ntBASIC18.32■□□□□ 0.52
RNF13O43567 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF13O43567 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.32■□□□□ 0.52
RNF13O43567 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF13O43567 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF13O43567 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF13O43567 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF13O43567 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF13O43567 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF13O43567 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF13O43567 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
RNF13O43567 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF13O43567 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF13O43567 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF13O43567 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF13O43567 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF13O43567 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF13O43567 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF13O43567 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.31■□□□□ 0.52
RNF13O43567 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF13O43567 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF13O43567 AL591742.1-201ENST00000604433 565 ntBASIC18.31■□□□□ 0.52
RNF13O43567 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.31■□□□□ 0.52
RNF13O43567 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF13O43567 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF13O43567 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF13O43567 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF13O43567 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF13O43567 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF13O43567 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF13O43567 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF13O43567 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF13O43567 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF13O43567 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF13O43567 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF13O43567 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF13O43567 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF13O43567 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RNF13O43567 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF13O43567 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF13O43567 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RNF13O43567 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF13O43567 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF13O43567 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.3■□□□□ 0.52
RNF13O43567 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF13O43567 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF13O43567 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RNF13O43567 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF13O43567 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF13O43567 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF13O43567 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
RNF13O43567 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RNF13O43567 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
RNF13O43567 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF13O43567 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF13O43567 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF13O43567 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF13O43567 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms