Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
XRCC2O43543 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC2O43543 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC2O43543 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC2O43543 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
XRCC2O43543 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
XRCC2O43543 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
XRCC2O43543 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC2O43543 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC2O43543 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.51■□□□□ 0.39
XRCC2O43543 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC2O43543 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC2O43543 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC2O43543 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.51■□□□□ 0.39
XRCC2O43543 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC2O43543 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.5■□□□□ 0.39
XRCC2O43543 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.5■□□□□ 0.39
XRCC2O43543 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.5■□□□□ 0.39
XRCC2O43543 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.5■□□□□ 0.39
XRCC2O43543 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
XRCC2O43543 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.5■□□□□ 0.39
XRCC2O43543 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 CYP2T1P-201ENST00000432607 1285 ntBASIC17.5■□□□□ 0.39
XRCC2O43543 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.5■□□□□ 0.39
XRCC2O43543 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.5■□□□□ 0.39
XRCC2O43543 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.5■□□□□ 0.39
XRCC2O43543 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC2O43543 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC2O43543 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC2O43543 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC2O43543 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC2O43543 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.49■□□□□ 0.39
XRCC2O43543 DPP3P2-201ENST00000416030 1696 ntBASIC17.49■□□□□ 0.39
XRCC2O43543 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.49■□□□□ 0.39
XRCC2O43543 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC2O43543 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.49■□□□□ 0.39
XRCC2O43543 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.49■□□□□ 0.39
XRCC2O43543 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.49■□□□□ 0.39
XRCC2O43543 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.49■□□□□ 0.39
XRCC2O43543 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC2O43543 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.49■□□□□ 0.39
XRCC2O43543 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.49■□□□□ 0.39
XRCC2O43543 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.49■□□□□ 0.39
XRCC2O43543 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC2O43543 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC2O43543 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
XRCC2O43543 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.49■□□□□ 0.39
XRCC2O43543 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC2O43543 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC2O43543 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.48■□□□□ 0.39
XRCC2O43543 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC2O43543 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC2O43543 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
XRCC2O43543 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC2O43543 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
XRCC2O43543 MIR935-201ENST00000401179 91 ntBASIC17.48■□□□□ 0.39
XRCC2O43543 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
XRCC2O43543 OR10C1-204ENST00000622521 1039 ntBASIC17.48■□□□□ 0.39
XRCC2O43543 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC2O43543 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
XRCC2O43543 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.48■□□□□ 0.39
XRCC2O43543 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
XRCC2O43543 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC2O43543 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.48■□□□□ 0.39
XRCC2O43543 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.48■□□□□ 0.39
XRCC2O43543 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.48■□□□□ 0.39
XRCC2O43543 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC2O43543 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
XRCC2O43543 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC2O43543 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC2O43543 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC2O43543 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
XRCC2O43543 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.47■□□□□ 0.39
XRCC2O43543 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.47■□□□□ 0.39
XRCC2O43543 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.47■□□□□ 0.39
XRCC2O43543 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.47■□□□□ 0.39
XRCC2O43543 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.47■□□□□ 0.39
XRCC2O43543 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.47■□□□□ 0.39
XRCC2O43543 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC2O43543 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
XRCC2O43543 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms