Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PAX4O43316 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PAX4O43316 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.38□□□□□ -0.11
PAX4O43316 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.38□□□□□ -0.11
PAX4O43316 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PAX4O43316 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.38□□□□□ -0.11
PAX4O43316 AC026185.1-201ENST00000445748 174 ntBASIC14.38□□□□□ -0.11
PAX4O43316 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.38□□□□□ -0.11
PAX4O43316 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PAX4O43316 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.38□□□□□ -0.11
PAX4O43316 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PAX4O43316 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PAX4O43316 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.38□□□□□ -0.11
PAX4O43316 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC14.38□□□□□ -0.11
PAX4O43316 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PAX4O43316 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.38□□□□□ -0.11
PAX4O43316 AC007225.1-201ENST00000566331 1836 ntBASIC14.38□□□□□ -0.11
PAX4O43316 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PAX4O43316 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PAX4O43316 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.38□□□□□ -0.11
PAX4O43316 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PAX4O43316 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PAX4O43316 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PAX4O43316 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PAX4O43316 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PAX4O43316 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
PAX4O43316 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PAX4O43316 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PAX4O43316 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PAX4O43316 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PAX4O43316 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PAX4O43316 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PAX4O43316 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PAX4O43316 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PAX4O43316 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.37□□□□□ -0.11
PAX4O43316 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PAX4O43316 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PAX4O43316 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PAX4O43316 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.37□□□□□ -0.11
PAX4O43316 CYP2T1P-201ENST00000432607 1285 ntBASIC14.37□□□□□ -0.11
PAX4O43316 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.37□□□□□ -0.11
PAX4O43316 RARRES2P4-201ENST00000514074 484 ntBASIC14.37□□□□□ -0.11
PAX4O43316 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PAX4O43316 AC016405.3-201ENST00000607710 860 ntBASIC14.37□□□□□ -0.11
PAX4O43316 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.37□□□□□ -0.11
PAX4O43316 AC073130.3-201ENST00000624389 2278 ntBASIC14.37□□□□□ -0.11
PAX4O43316 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PAX4O43316 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PAX4O43316 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PAX4O43316 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PAX4O43316 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PAX4O43316 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PAX4O43316 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PAX4O43316 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.37□□□□□ -0.11
PAX4O43316 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PAX4O43316 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.37□□□□□ -0.11
PAX4O43316 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX4O43316 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX4O43316 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.36□□□□□ -0.11
PAX4O43316 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.36□□□□□ -0.11
PAX4O43316 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX4O43316 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.36□□□□□ -0.11
PAX4O43316 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.36□□□□□ -0.11
PAX4O43316 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX4O43316 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX4O43316 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.36□□□□□ -0.11
PAX4O43316 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.36□□□□□ -0.11
PAX4O43316 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PAX4O43316 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX4O43316 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
PAX4O43316 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX4O43316 CDCA4P2-201ENST00000441182 718 ntBASIC14.36□□□□□ -0.11
PAX4O43316 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.36□□□□□ -0.11
PAX4O43316 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.36□□□□□ -0.11
PAX4O43316 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PAX4O43316 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX4O43316 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PAX4O43316 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PAX4O43316 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PAX4O43316 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
PAX4O43316 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX4O43316 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX4O43316 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PAX4O43316 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PAX4O43316 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX4O43316 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.36□□□□□ -0.11
PAX4O43316 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX4O43316 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX4O43316 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX4O43316 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
PAX4O43316 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PAX4O43316 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX4O43316 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PAX4O43316 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX4O43316 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PAX4O43316 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
PAX4O43316 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.35□□□□□ -0.11
PAX4O43316 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PAX4O43316 AC006970.2-201ENST00000450065 779 ntBASIC14.35□□□□□ -0.11
PAX4O43316 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms