Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.61■□□□□ 0.73
HDAC3O15379 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC3O15379 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HDAC3O15379 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC3O15379 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC3O15379 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC3O15379 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.61■□□□□ 0.73
HDAC3O15379 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC3O15379 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC3O15379 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC3O15379 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HDAC3O15379 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.6■□□□□ 0.73
HDAC3O15379 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC3O15379 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC3O15379 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC3O15379 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.6■□□□□ 0.73
HDAC3O15379 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HDAC3O15379 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HDAC3O15379 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC3O15379 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC3O15379 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
HDAC3O15379 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC3O15379 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HDAC3O15379 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC3O15379 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC3O15379 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.6■□□□□ 0.73
HDAC3O15379 MIR6084-201ENST00000622012 110 ntBASIC19.6■□□□□ 0.73
HDAC3O15379 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HDAC3O15379 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HDAC3O15379 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HDAC3O15379 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HDAC3O15379 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC3O15379 TREX1-205ENST00000625293 1783 ntBASIC19.6■□□□□ 0.73
HDAC3O15379 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC3O15379 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC3O15379 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.59■□□□□ 0.73
HDAC3O15379 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC3O15379 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC3O15379 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.59■□□□□ 0.73
HDAC3O15379 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HDAC3O15379 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.59■□□□□ 0.73
HDAC3O15379 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC3O15379 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.59■□□□□ 0.73
HDAC3O15379 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HDAC3O15379 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.59■□□□□ 0.73
HDAC3O15379 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.59■□□□□ 0.73
HDAC3O15379 AC110285.6-201ENST00000617652 491 ntBASIC19.59■□□□□ 0.73
HDAC3O15379 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC3O15379 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC3O15379 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC3O15379 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.59■□□□□ 0.73
HDAC3O15379 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC3O15379 AC093484.2-201ENST00000580996 2166 ntBASIC19.59■□□□□ 0.73
HDAC3O15379 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC3O15379 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.58■□□□□ 0.73
HDAC3O15379 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.58■□□□□ 0.73
HDAC3O15379 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HDAC3O15379 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
HDAC3O15379 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
HDAC3O15379 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HDAC3O15379 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HDAC3O15379 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HDAC3O15379 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HDAC3O15379 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
HDAC3O15379 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HDAC3O15379 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
HDAC3O15379 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.58■□□□□ 0.72
HDAC3O15379 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.58■□□□□ 0.72
HDAC3O15379 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HDAC3O15379 AC091799.1-201ENST00000422823 811 ntBASIC19.58■□□□□ 0.72
HDAC3O15379 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.58■□□□□ 0.72
HDAC3O15379 AC007322.3-201ENST00000426526 701 ntBASIC19.58■□□□□ 0.72
HDAC3O15379 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HDAC3O15379 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.58■□□□□ 0.72
HDAC3O15379 FAM21FP-204ENST00000608637 956 ntBASIC19.58■□□□□ 0.72
HDAC3O15379 AC243732.1-201ENST00000612648 864 ntBASIC19.58■□□□□ 0.72
HDAC3O15379 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.58■□□□□ 0.72
HDAC3O15379 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.58■□□□□ 0.72
HDAC3O15379 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
HDAC3O15379 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.58■□□□□ 0.72
HDAC3O15379 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.58■□□□□ 0.72
HDAC3O15379 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HDAC3O15379 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.58■□□□□ 0.72
HDAC3O15379 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
HDAC3O15379 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.58■□□□□ 0.72
HDAC3O15379 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HDAC3O15379 TNXA-203ENST00000507684 2038 ntBASIC19.58■□□□□ 0.72
HDAC3O15379 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.57■□□□□ 0.72
HDAC3O15379 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.57■□□□□ 0.72
HDAC3O15379 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.57■□□□□ 0.72
HDAC3O15379 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
HDAC3O15379 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC3O15379 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC3O15379 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.57■□□□□ 0.72
HDAC3O15379 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
HDAC3O15379 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC3O15379 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC3O15379 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC3O15379 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC3O15379 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms