Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.58■□□□□ 0.73
CDX4O14627 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDX4O14627 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDX4O14627 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.58■□□□□ 0.73
CDX4O14627 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDX4O14627 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDX4O14627 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.58■□□□□ 0.72
CDX4O14627 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.58■□□□□ 0.72
CDX4O14627 UPK3BP1-201ENST00000428678 509 ntBASIC19.58■□□□□ 0.72
CDX4O14627 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.58■□□□□ 0.72
CDX4O14627 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDX4O14627 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.58■□□□□ 0.72
CDX4O14627 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.58■□□□□ 0.72
CDX4O14627 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDX4O14627 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.58■□□□□ 0.72
CDX4O14627 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDX4O14627 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDX4O14627 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDX4O14627 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDX4O14627 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CDX4O14627 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.57■□□□□ 0.72
CDX4O14627 ATP5G1P1-201ENST00000448724 379 ntBASIC19.57■□□□□ 0.72
CDX4O14627 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.57■□□□□ 0.72
CDX4O14627 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.57■□□□□ 0.72
CDX4O14627 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDX4O14627 AL358472.4-201ENST00000633140 710 ntBASIC19.57■□□□□ 0.72
CDX4O14627 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDX4O14627 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.57■□□□□ 0.72
CDX4O14627 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDX4O14627 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.56■□□□□ 0.72
CDX4O14627 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CDX4O14627 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CDX4O14627 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDX4O14627 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.56■□□□□ 0.72
CDX4O14627 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDX4O14627 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.56■□□□□ 0.72
CDX4O14627 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.56■□□□□ 0.72
CDX4O14627 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDX4O14627 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.56■□□□□ 0.72
CDX4O14627 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.56■□□□□ 0.72
CDX4O14627 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDX4O14627 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.56■□□□□ 0.72
CDX4O14627 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.56■□□□□ 0.72
CDX4O14627 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDX4O14627 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDX4O14627 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.56■□□□□ 0.72
CDX4O14627 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDX4O14627 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDX4O14627 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDX4O14627 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDX4O14627 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CDX4O14627 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDX4O14627 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDX4O14627 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.55■□□□□ 0.72
CDX4O14627 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDX4O14627 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDX4O14627 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDX4O14627 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.55■□□□□ 0.72
CDX4O14627 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.55■□□□□ 0.72
CDX4O14627 ECEL1P2-202ENST00000465689 757 ntBASIC19.55■□□□□ 0.72
CDX4O14627 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDX4O14627 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.55■□□□□ 0.72
CDX4O14627 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDX4O14627 AC091076.1-201ENST00000610741 619 ntBASIC19.55■□□□□ 0.72
CDX4O14627 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDX4O14627 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CDX4O14627 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CDX4O14627 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CDX4O14627 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDX4O14627 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDX4O14627 AC027702.1-201ENST00000563810 1770 ntBASIC19.55■□□□□ 0.72
CDX4O14627 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDX4O14627 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDX4O14627 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDX4O14627 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CDX4O14627 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDX4O14627 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDX4O14627 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.54■□□□□ 0.72
CDX4O14627 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDX4O14627 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.54■□□□□ 0.72
CDX4O14627 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDX4O14627 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDX4O14627 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDX4O14627 MESTP1-201ENST00000404287 994 ntBASIC19.54■□□□□ 0.72
CDX4O14627 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDX4O14627 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDX4O14627 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.54■□□□□ 0.72
CDX4O14627 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDX4O14627 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.54■□□□□ 0.72
CDX4O14627 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDX4O14627 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.54■□□□□ 0.72
CDX4O14627 EGLN1P1-201ENST00000531623 762 ntBASIC19.54■□□□□ 0.72
CDX4O14627 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.54■□□□□ 0.72
CDX4O14627 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDX4O14627 C2orf69P3-201ENST00000565542 1120 ntBASIC19.54■□□□□ 0.72
CDX4O14627 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CDX4O14627 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDX4O14627 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
CDX4O14627 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDX4O14627 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms