Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.81■□□□□ 0.6
AP3D1O14617 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.81■□□□□ 0.6
AP3D1O14617 AC243732.1-201ENST00000612648 864 ntBASIC18.81■□□□□ 0.6
AP3D1O14617 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.81■□□□□ 0.6
AP3D1O14617 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AP3D1O14617 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.81■□□□□ 0.6
AP3D1O14617 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AP3D1O14617 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.81■□□□□ 0.6
AP3D1O14617 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3D1O14617 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3D1O14617 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.81■□□□□ 0.6
AP3D1O14617 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AP3D1O14617 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3D1O14617 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3D1O14617 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3D1O14617 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
AP3D1O14617 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AP3D1O14617 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AP3D1O14617 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
AP3D1O14617 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3D1O14617 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3D1O14617 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.8■□□□□ 0.6
AP3D1O14617 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.8■□□□□ 0.6
AP3D1O14617 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.8■□□□□ 0.6
AP3D1O14617 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AP3D1O14617 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.8■□□□□ 0.6
AP3D1O14617 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.8■□□□□ 0.6
AP3D1O14617 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.8■□□□□ 0.6
AP3D1O14617 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.8■□□□□ 0.6
AP3D1O14617 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AP3D1O14617 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AP3D1O14617 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
AP3D1O14617 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.8■□□□□ 0.6
AP3D1O14617 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3D1O14617 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
AP3D1O14617 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.8■□□□□ 0.6
AP3D1O14617 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.8■□□□□ 0.6
AP3D1O14617 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AP3D1O14617 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AP3D1O14617 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
AP3D1O14617 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
AP3D1O14617 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3D1O14617 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
AP3D1O14617 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3D1O14617 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.8■□□□□ 0.6
AP3D1O14617 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
AP3D1O14617 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP3D1O14617 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP3D1O14617 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3D1O14617 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3D1O14617 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
AP3D1O14617 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3D1O14617 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3D1O14617 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3D1O14617 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP3D1O14617 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP3D1O14617 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.79■□□□□ 0.6
AP3D1O14617 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP3D1O14617 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3D1O14617 AL162377.1-201ENST00000618844 1793 ntBASIC18.79■□□□□ 0.6
AP3D1O14617 AL162430.1-201ENST00000480705 870 ntBASIC18.79■□□□□ 0.6
AP3D1O14617 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
AP3D1O14617 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.79■□□□□ 0.6
AP3D1O14617 AC137761.2-201ENST00000561729 223 ntBASIC18.79■□□□□ 0.6
AP3D1O14617 AC145350.3-201ENST00000569033 163 ntBASIC18.79■□□□□ 0.6
AP3D1O14617 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.79■□□□□ 0.6
AP3D1O14617 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3D1O14617 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP3D1O14617 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
AP3D1O14617 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3D1O14617 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
AP3D1O14617 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.79■□□□□ 0.6
AP3D1O14617 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.79■□□□□ 0.6
AP3D1O14617 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP3D1O14617 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3D1O14617 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3D1O14617 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
AP3D1O14617 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.78■□□□□ 0.6
AP3D1O14617 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3D1O14617 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
AP3D1O14617 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
AP3D1O14617 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
AP3D1O14617 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3D1O14617 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3D1O14617 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.78■□□□□ 0.6
AP3D1O14617 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.78■□□□□ 0.6
AP3D1O14617 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3D1O14617 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP3D1O14617 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3D1O14617 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.78■□□□□ 0.6
AP3D1O14617 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
AP3D1O14617 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
AP3D1O14617 MIR2861-201ENST00000636310 90 ntBASIC18.78■□□□□ 0.6
AP3D1O14617 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
AP3D1O14617 PCDHAC2-203ENST00000615316 3011 ntBASIC18.78■□□□□ 0.6
AP3D1O14617 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3D1O14617 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3D1O14617 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.77■□□□□ 0.6
AP3D1O14617 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
AP3D1O14617 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms