Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.58■□□□□ 0.72
UBFD1O14562 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBFD1O14562 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBFD1O14562 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.57■□□□□ 0.72
UBFD1O14562 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBFD1O14562 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBFD1O14562 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.57■□□□□ 0.72
UBFD1O14562 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.57■□□□□ 0.72
UBFD1O14562 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.57■□□□□ 0.72
UBFD1O14562 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBFD1O14562 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.57■□□□□ 0.72
UBFD1O14562 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBFD1O14562 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
UBFD1O14562 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.57■□□□□ 0.72
UBFD1O14562 AL356652.1-201ENST00000615962 565 ntBASIC19.57■□□□□ 0.72
UBFD1O14562 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBFD1O14562 TMEM179-206ENST00000616017 1645 ntBASIC19.57■□□□□ 0.72
UBFD1O14562 AC087633.2-202ENST00000565166 1439 ntBASIC19.57■□□□□ 0.72
UBFD1O14562 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBFD1O14562 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
UBFD1O14562 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
UBFD1O14562 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
UBFD1O14562 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBFD1O14562 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
UBFD1O14562 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBFD1O14562 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBFD1O14562 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBFD1O14562 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBFD1O14562 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBFD1O14562 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.56■□□□□ 0.72
UBFD1O14562 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.56■□□□□ 0.72
UBFD1O14562 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
UBFD1O14562 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
UBFD1O14562 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBFD1O14562 AC097381.1-201ENST00000429019 1296 ntBASIC19.56■□□□□ 0.72
UBFD1O14562 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBFD1O14562 TERF1P5-201ENST00000477545 1207 ntBASIC19.56■□□□□ 0.72
UBFD1O14562 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBFD1O14562 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.56■□□□□ 0.72
UBFD1O14562 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.56■□□□□ 0.72
UBFD1O14562 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.56■□□□□ 0.72
UBFD1O14562 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBFD1O14562 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.56■□□□□ 0.72
UBFD1O14562 AC010536.3-201ENST00000620306 533 ntBASIC19.56■□□□□ 0.72
UBFD1O14562 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBFD1O14562 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
UBFD1O14562 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBFD1O14562 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBFD1O14562 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBFD1O14562 CYP21A1P-202ENST00000354927 1481 ntBASIC19.55■□□□□ 0.72
UBFD1O14562 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBFD1O14562 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.55■□□□□ 0.72
UBFD1O14562 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
UBFD1O14562 AC087289.5-201ENST00000586076 3175 ntBASIC19.55■□□□□ 0.72
UBFD1O14562 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
UBFD1O14562 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBFD1O14562 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBFD1O14562 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBFD1O14562 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBFD1O14562 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBFD1O14562 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
UBFD1O14562 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
UBFD1O14562 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.55■□□□□ 0.72
UBFD1O14562 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.55■□□□□ 0.72
UBFD1O14562 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBFD1O14562 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.55■□□□□ 0.72
UBFD1O14562 NTF6G-201ENST00000591094 616 ntBASIC19.55■□□□□ 0.72
UBFD1O14562 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBFD1O14562 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.55■□□□□ 0.72
UBFD1O14562 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
UBFD1O14562 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.55■□□□□ 0.72
UBFD1O14562 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.55■□□□□ 0.72
UBFD1O14562 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBFD1O14562 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBFD1O14562 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
UBFD1O14562 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.54■□□□□ 0.72
UBFD1O14562 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBFD1O14562 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBFD1O14562 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.54■□□□□ 0.72
UBFD1O14562 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBFD1O14562 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
UBFD1O14562 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.54■□□□□ 0.72
UBFD1O14562 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBFD1O14562 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.54■□□□□ 0.72
UBFD1O14562 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.54■□□□□ 0.72
UBFD1O14562 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.54■□□□□ 0.72
UBFD1O14562 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBFD1O14562 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.54■□□□□ 0.72
UBFD1O14562 AL591742.1-201ENST00000604433 565 ntBASIC19.54■□□□□ 0.72
UBFD1O14562 AC016405.3-201ENST00000607710 860 ntBASIC19.54■□□□□ 0.72
UBFD1O14562 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBFD1O14562 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBFD1O14562 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UBFD1O14562 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBFD1O14562 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.54■□□□□ 0.72
UBFD1O14562 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBFD1O14562 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBFD1O14562 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBFD1O14562 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBFD1O14562 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms