Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
TRAFD1O14545 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAFD1O14545 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAFD1O14545 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAFD1O14545 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAFD1O14545 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAFD1O14545 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.65■□□□□ 0.9
TRAFD1O14545 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAFD1O14545 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAFD1O14545 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAFD1O14545 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.65■□□□□ 0.9
TRAFD1O14545 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAFD1O14545 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAFD1O14545 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAFD1O14545 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAFD1O14545 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.65■□□□□ 0.9
TRAFD1O14545 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.65■□□□□ 0.9
TRAFD1O14545 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAFD1O14545 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAFD1O14545 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAFD1O14545 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAFD1O14545 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAFD1O14545 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.65■□□□□ 0.9
TRAFD1O14545 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.65■□□□□ 0.9
TRAFD1O14545 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.65■□□□□ 0.9
TRAFD1O14545 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.65■□□□□ 0.9
TRAFD1O14545 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAFD1O14545 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAFD1O14545 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAFD1O14545 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
TRAFD1O14545 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.64■□□□□ 0.9
TRAFD1O14545 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRAFD1O14545 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAFD1O14545 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
TRAFD1O14545 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAFD1O14545 KRT17P1-201ENST00000399211 1546 ntBASIC20.64■□□□□ 0.9
TRAFD1O14545 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.64■□□□□ 0.89
TRAFD1O14545 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAFD1O14545 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.64■□□□□ 0.89
TRAFD1O14545 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAFD1O14545 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TRAFD1O14545 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAFD1O14545 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAFD1O14545 AL355802.2-201ENST00000402069 882 ntBASIC20.64■□□□□ 0.89
TRAFD1O14545 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TRAFD1O14545 BX276092.2-201ENST00000417668 665 ntBASIC20.64■□□□□ 0.89
TRAFD1O14545 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.64■□□□□ 0.89
TRAFD1O14545 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.64■□□□□ 0.89
TRAFD1O14545 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAFD1O14545 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAFD1O14545 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.64■□□□□ 0.89
TRAFD1O14545 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
TRAFD1O14545 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAFD1O14545 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAFD1O14545 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.64■□□□□ 0.89
TRAFD1O14545 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.64■□□□□ 0.89
TRAFD1O14545 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAFD1O14545 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.64■□□□□ 0.89
TRAFD1O14545 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.64■□□□□ 0.89
TRAFD1O14545 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAFD1O14545 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAFD1O14545 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAFD1O14545 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TRAFD1O14545 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAFD1O14545 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.63■□□□□ 0.89
TRAFD1O14545 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAFD1O14545 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAFD1O14545 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.63■□□□□ 0.89
TRAFD1O14545 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.63■□□□□ 0.89
TRAFD1O14545 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.63■□□□□ 0.89
TRAFD1O14545 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAFD1O14545 AC073210.2-201ENST00000430369 194 ntBASIC20.63■□□□□ 0.89
TRAFD1O14545 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.63■□□□□ 0.89
TRAFD1O14545 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAFD1O14545 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAFD1O14545 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TRAFD1O14545 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAFD1O14545 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.63■□□□□ 0.89
TRAFD1O14545 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAFD1O14545 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAFD1O14545 AL020996.1-203ENST00000536896 2307 ntBASIC20.62■□□□□ 0.89
TRAFD1O14545 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAFD1O14545 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TRAFD1O14545 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAFD1O14545 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAFD1O14545 AC087633.2-202ENST00000565166 1439 ntBASIC20.62■□□□□ 0.89
TRAFD1O14545 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAFD1O14545 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TRAFD1O14545 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAFD1O14545 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRAFD1O14545 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAFD1O14545 KRT18P68-201ENST00000392293 1000 ntBASIC20.62■□□□□ 0.89
TRAFD1O14545 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRAFD1O14545 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAFD1O14545 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAFD1O14545 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.62■□□□□ 0.89
TRAFD1O14545 AC092118.2-201ENST00000613495 667 ntBASIC20.62■□□□□ 0.89
TRAFD1O14545 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAFD1O14545 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAFD1O14545 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms