Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.66■■□□□ 1.06
SOX1O00570 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.66■■□□□ 1.06
SOX1O00570 AL359075.1-203ENST00000462729 1002 ntBASIC21.66■■□□□ 1.06
SOX1O00570 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.66■■□□□ 1.06
SOX1O00570 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.66■■□□□ 1.06
SOX1O00570 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.66■■□□□ 1.06
SOX1O00570 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SOX1O00570 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
SOX1O00570 AL031985.4-201ENST00000642138 673 ntBASIC21.66■■□□□ 1.06
SOX1O00570 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOX1O00570 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SOX1O00570 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOX1O00570 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SOX1O00570 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SOX1O00570 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SOX1O00570 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SOX1O00570 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.65■■□□□ 1.06
SOX1O00570 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.65■■□□□ 1.06
SOX1O00570 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SOX1O00570 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SOX1O00570 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
SOX1O00570 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.65■■□□□ 1.06
SOX1O00570 AC097488.1-201ENST00000507834 756 ntBASIC21.65■■□□□ 1.06
SOX1O00570 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SOX1O00570 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.65■■□□□ 1.06
SOX1O00570 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
SOX1O00570 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SOX1O00570 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SOX1O00570 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SOX1O00570 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.64■■□□□ 1.05
SOX1O00570 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SOX1O00570 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.64■■□□□ 1.05
SOX1O00570 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.64■■□□□ 1.05
SOX1O00570 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.64■■□□□ 1.05
SOX1O00570 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SOX1O00570 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.64■■□□□ 1.05
SOX1O00570 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SOX1O00570 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SOX1O00570 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SOX1O00570 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.64■■□□□ 1.05
SOX1O00570 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
SOX1O00570 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SOX1O00570 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
SOX1O00570 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
SOX1O00570 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
SOX1O00570 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SOX1O00570 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.63■■□□□ 1.05
SOX1O00570 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SOX1O00570 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.63■■□□□ 1.05
SOX1O00570 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SOX1O00570 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SOX1O00570 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SOX1O00570 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.63■■□□□ 1.05
SOX1O00570 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.63■■□□□ 1.05
SOX1O00570 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.63■■□□□ 1.05
SOX1O00570 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC21.63■■□□□ 1.05
SOX1O00570 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.63■■□□□ 1.05
SOX1O00570 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.63■■□□□ 1.05
SOX1O00570 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SOX1O00570 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SOX1O00570 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.63■■□□□ 1.05
SOX1O00570 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.63■■□□□ 1.05
SOX1O00570 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SOX1O00570 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SOX1O00570 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.63■■□□□ 1.05
SOX1O00570 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SOX1O00570 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SOX1O00570 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SOX1O00570 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
SOX1O00570 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SOX1O00570 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SOX1O00570 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SOX1O00570 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SOX1O00570 AC139530.1-201ENST00000575312 1977 ntBASIC21.62■■□□□ 1.05
SOX1O00570 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SOX1O00570 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SOX1O00570 B3GAT3P1-201ENST00000471720 806 ntBASIC21.62■■□□□ 1.05
SOX1O00570 DGCR10-201ENST00000609839 495 ntBASIC21.62■■□□□ 1.05
SOX1O00570 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
SOX1O00570 AC139530.3-201ENST00000620344 690 ntBASIC21.62■■□□□ 1.05
SOX1O00570 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SOX1O00570 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.62■■□□□ 1.05
SOX1O00570 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.62■■□□□ 1.05
SOX1O00570 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SOX1O00570 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SOX1O00570 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SOX1O00570 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.61■■□□□ 1.05
SOX1O00570 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SOX1O00570 AC092068.2-201ENST00000590491 1708 ntBASIC21.61■■□□□ 1.05
SOX1O00570 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SOX1O00570 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SOX1O00570 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.61■■□□□ 1.05
SOX1O00570 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SOX1O00570 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.61■■□□□ 1.05
SOX1O00570 AC011506.1-201ENST00000474329 610 ntBASIC21.61■■□□□ 1.05
SOX1O00570 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.61■■□□□ 1.05
SOX1O00570 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SOX1O00570 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.61■■□□□ 1.05
SOX1O00570 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
SOX1O00570 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms