Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXN3O00409 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.63■■□□□ 1.05
FOXN3O00409 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXN3O00409 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXN3O00409 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXN3O00409 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXN3O00409 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.63■■□□□ 1.05
FOXN3O00409 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.63■■□□□ 1.05
FOXN3O00409 CDCA4P2-201ENST00000441182 718 ntBASIC21.63■■□□□ 1.05
FOXN3O00409 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.63■■□□□ 1.05
FOXN3O00409 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.63■■□□□ 1.05
FOXN3O00409 AC005181.1-201ENST00000604782 1256 ntBASIC21.63■■□□□ 1.05
FOXN3O00409 OR10C1-204ENST00000622521 1039 ntBASIC21.63■■□□□ 1.05
FOXN3O00409 AC008694.1-202ENST00000636953 945 ntBASIC21.63■■□□□ 1.05
FOXN3O00409 AC073111.5-205ENST00000641717 521 ntBASIC21.63■■□□□ 1.05
FOXN3O00409 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.63■■□□□ 1.05
FOXN3O00409 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXN3O00409 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXN3O00409 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
FOXN3O00409 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.63■■□□□ 1.05
FOXN3O00409 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.63■■□□□ 1.05
FOXN3O00409 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXN3O00409 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXN3O00409 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.63■■□□□ 1.05
FOXN3O00409 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXN3O00409 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.62■■□□□ 1.05
FOXN3O00409 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.62■■□□□ 1.05
FOXN3O00409 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXN3O00409 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.62■■□□□ 1.05
FOXN3O00409 CYP2T3P-201ENST00000601990 817 ntBASIC21.62■■□□□ 1.05
FOXN3O00409 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXN3O00409 AL137784.2-201ENST00000607332 1000 ntBASIC21.62■■□□□ 1.05
FOXN3O00409 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FOXN3O00409 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FOXN3O00409 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXN3O00409 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FOXN3O00409 AC010980.2-201ENST00000587099 1412 ntBASIC21.62■■□□□ 1.05
FOXN3O00409 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXN3O00409 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXN3O00409 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FOXN3O00409 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXN3O00409 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
FOXN3O00409 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXN3O00409 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.61■■□□□ 1.05
FOXN3O00409 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
FOXN3O00409 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXN3O00409 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXN3O00409 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXN3O00409 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
FOXN3O00409 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
FOXN3O00409 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
FOXN3O00409 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXN3O00409 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.61■■□□□ 1.05
FOXN3O00409 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
FOXN3O00409 AC093787.1-201ENST00000450396 207 ntBASIC21.61■■□□□ 1.05
FOXN3O00409 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
FOXN3O00409 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXN3O00409 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXN3O00409 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXN3O00409 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
FOXN3O00409 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.61■■□□□ 1.05
FOXN3O00409 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXN3O00409 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.6■■□□□ 1.05
FOXN3O00409 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN3O00409 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN3O00409 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
FOXN3O00409 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.6■■□□□ 1.05
FOXN3O00409 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN3O00409 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN3O00409 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.6■■□□□ 1.05
FOXN3O00409 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN3O00409 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN3O00409 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN3O00409 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN3O00409 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.6■■□□□ 1.05
FOXN3O00409 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXN3O00409 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.59■■□□□ 1.05
FOXN3O00409 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.59■■□□□ 1.05
FOXN3O00409 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.59■■□□□ 1.05
FOXN3O00409 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.59■■□□□ 1.05
FOXN3O00409 AL512625.2-201ENST00000417533 625 ntBASIC21.59■■□□□ 1.05
FOXN3O00409 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
FOXN3O00409 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.59■■□□□ 1.05
FOXN3O00409 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXN3O00409 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.59■■□□□ 1.05
FOXN3O00409 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
FOXN3O00409 RAP2CP1-201ENST00000605103 478 ntBASIC21.59■■□□□ 1.05
FOXN3O00409 AL691432.2-201ENST00000607222 2038 ntBASIC21.59■■□□□ 1.05
FOXN3O00409 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXN3O00409 AC105020.6-201ENST00000621523 1217 ntBASIC21.59■■□□□ 1.05
FOXN3O00409 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
FOXN3O00409 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
FOXN3O00409 PTBP1P-201ENST00000554374 1601 ntBASIC21.58■■□□□ 1.05
FOXN3O00409 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FOXN3O00409 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
FOXN3O00409 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
FOXN3O00409 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.05
FOXN3O00409 BX119927.1-201ENST00000636596 1552 ntBASIC21.58■■□□□ 1.05
FOXN3O00409 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FOXN3O00409 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms