Protein–RNA interactions for Protein: O00358

FOXE1, Forkhead box protein E1, humanhuman

Predicted RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE1O00358 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXE1O00358 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXE1O00358 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXE1O00358 AC026185.1-201ENST00000445748 174 ntBASIC19.27■□□□□ 0.68
FOXE1O00358 AC093787.1-201ENST00000450396 207 ntBASIC19.27■□□□□ 0.68
FOXE1O00358 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.27■□□□□ 0.68
FOXE1O00358 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.27■□□□□ 0.68
FOXE1O00358 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.27■□□□□ 0.68
FOXE1O00358 AL391422.3-201ENST00000603791 2761 ntBASIC19.27■□□□□ 0.68
FOXE1O00358 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
FOXE1O00358 BX119927.1-201ENST00000636596 1552 ntBASIC19.27■□□□□ 0.67
FOXE1O00358 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.27■□□□□ 0.67
FOXE1O00358 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
FOXE1O00358 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXE1O00358 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
FOXE1O00358 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.26■□□□□ 0.67
FOXE1O00358 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FOXE1O00358 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
FOXE1O00358 PTBP1P-201ENST00000554374 1601 ntBASIC19.26■□□□□ 0.67
FOXE1O00358 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXE1O00358 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXE1O00358 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXE1O00358 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.26■□□□□ 0.67
FOXE1O00358 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
FOXE1O00358 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
FOXE1O00358 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
FOXE1O00358 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.26■□□□□ 0.67
FOXE1O00358 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.26■□□□□ 0.67
FOXE1O00358 AC112907.3-201ENST00000577781 2400 ntBASIC19.26■□□□□ 0.67
FOXE1O00358 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.26■□□□□ 0.67
FOXE1O00358 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXE1O00358 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXE1O00358 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.26■□□□□ 0.67
FOXE1O00358 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FOXE1O00358 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXE1O00358 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
FOXE1O00358 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
FOXE1O00358 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.25■□□□□ 0.67
FOXE1O00358 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXE1O00358 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXE1O00358 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXE1O00358 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXE1O00358 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.25■□□□□ 0.67
FOXE1O00358 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXE1O00358 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXE1O00358 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXE1O00358 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXE1O00358 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXE1O00358 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.25■□□□□ 0.67
FOXE1O00358 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.25■□□□□ 0.67
FOXE1O00358 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXE1O00358 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXE1O00358 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXE1O00358 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXE1O00358 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
FOXE1O00358 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.25■□□□□ 0.67
FOXE1O00358 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXE1O00358 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXE1O00358 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXE1O00358 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
FOXE1O00358 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXE1O00358 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXE1O00358 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXE1O00358 AL050303.2-201ENST00000619798 666 ntBASIC19.24■□□□□ 0.67
FOXE1O00358 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXE1O00358 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXE1O00358 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.24■□□□□ 0.67
FOXE1O00358 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXE1O00358 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXE1O00358 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXE1O00358 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXE1O00358 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
FOXE1O00358 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
FOXE1O00358 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXE1O00358 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXE1O00358 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXE1O00358 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
FOXE1O00358 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXE1O00358 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXE1O00358 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.23■□□□□ 0.67
FOXE1O00358 AF201337.1-201ENST00000520239 748 ntBASIC19.23■□□□□ 0.67
FOXE1O00358 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.23■□□□□ 0.67
FOXE1O00358 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.23■□□□□ 0.67
FOXE1O00358 C2orf69P4-201ENST00000565394 541 ntBASIC19.23■□□□□ 0.67
FOXE1O00358 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.23■□□□□ 0.67
FOXE1O00358 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXE1O00358 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXE1O00358 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXE1O00358 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXE1O00358 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXE1O00358 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.23■□□□□ 0.67
FOXE1O00358 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXE1O00358 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXE1O00358 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXE1O00358 KRT17P1-201ENST00000399211 1546 ntBASIC19.22■□□□□ 0.67
FOXE1O00358 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.22■□□□□ 0.67
FOXE1O00358 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.22■□□□□ 0.67
FOXE1O00358 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXE1O00358 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXE1O00358 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms