Protein–RNA interactions for Protein: O00192

ARVCF, Armadillo repeat protein deleted in velo-cardio-facial syndrome, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARVCFO00192 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ARVCFO00192 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.25■■□□□ 1.15
ARVCFO00192 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.25■■□□□ 1.15
ARVCFO00192 NAPSB-206ENST00000562112 1266 ntBASIC22.25■■□□□ 1.15
ARVCFO00192 MIR2861-201ENST00000636310 90 ntBASIC22.25■■□□□ 1.15
ARVCFO00192 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.25■■□□□ 1.15
ARVCFO00192 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ARVCFO00192 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.25■■□□□ 1.15
ARVCFO00192 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
ARVCFO00192 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ARVCFO00192 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ARVCFO00192 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ARVCFO00192 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.24■■□□□ 1.15
ARVCFO00192 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
ARVCFO00192 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22.24■■□□□ 1.15
ARVCFO00192 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ARVCFO00192 KRT18P57-201ENST00000443599 1254 ntBASIC22.24■■□□□ 1.15
ARVCFO00192 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ARVCFO00192 AC116562.2-201ENST00000507042 360 ntBASIC22.24■■□□□ 1.15
ARVCFO00192 FITM1-202ENST00000559294 800 ntBASIC22.24■■□□□ 1.15
ARVCFO00192 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC22.24■■□□□ 1.15
ARVCFO00192 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.24■■□□□ 1.15
ARVCFO00192 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ARVCFO00192 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.24■■□□□ 1.15
ARVCFO00192 KRT18P22-201ENST00000402024 1347 ntBASIC22.24■■□□□ 1.15
ARVCFO00192 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ARVCFO00192 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.24■■□□□ 1.15
ARVCFO00192 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.23■■□□□ 1.15
ARVCFO00192 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ARVCFO00192 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ARVCFO00192 CYP2D8P-201ENST00000433633 1490 ntBASIC22.23■■□□□ 1.15
ARVCFO00192 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
ARVCFO00192 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
ARVCFO00192 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ARVCFO00192 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ARVCFO00192 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.23■■□□□ 1.15
ARVCFO00192 CR392000.1-201ENST00000624770 1228 ntBASIC22.23■■□□□ 1.15
ARVCFO00192 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ARVCFO00192 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ARVCFO00192 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ARVCFO00192 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ARVCFO00192 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
ARVCFO00192 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.22■■□□□ 1.15
ARVCFO00192 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ARVCFO00192 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ARVCFO00192 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC22.22■■□□□ 1.15
ARVCFO00192 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC22.22■■□□□ 1.15
ARVCFO00192 AL390955.1-201ENST00000428694 934 ntBASIC22.22■■□□□ 1.15
ARVCFO00192 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.22■■□□□ 1.15
ARVCFO00192 KSR1P1-201ENST00000446298 240 ntBASIC22.22■■□□□ 1.15
ARVCFO00192 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.22■■□□□ 1.15
ARVCFO00192 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.22■■□□□ 1.15
ARVCFO00192 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.22■■□□□ 1.15
ARVCFO00192 AC010947.1-201ENST00000623454 693 ntBASIC22.22■■□□□ 1.15
ARVCFO00192 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ARVCFO00192 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
ARVCFO00192 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ARVCFO00192 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ARVCFO00192 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ARVCFO00192 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
ARVCFO00192 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ARVCFO00192 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ARVCFO00192 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
ARVCFO00192 TERF1P1-201ENST00000311003 1181 ntBASIC22.21■■□□□ 1.15
ARVCFO00192 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ARVCFO00192 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
ARVCFO00192 AL137013.1-201ENST00000432946 1228 ntBASIC22.21■■□□□ 1.15
ARVCFO00192 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.21■■□□□ 1.15
ARVCFO00192 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.21■■□□□ 1.15
ARVCFO00192 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.21■■□□□ 1.15
ARVCFO00192 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC22.21■■□□□ 1.15
ARVCFO00192 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.21■■□□□ 1.15
ARVCFO00192 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ARVCFO00192 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
ARVCFO00192 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
ARVCFO00192 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ARVCFO00192 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ARVCFO00192 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.21■■□□□ 1.15
ARVCFO00192 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
ARVCFO00192 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ARVCFO00192 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ARVCFO00192 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
ARVCFO00192 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ARVCFO00192 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ARVCFO00192 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.2■■□□□ 1.14
ARVCFO00192 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22.2■■□□□ 1.14
ARVCFO00192 NIFKP9-201ENST00000419265 221 ntBASIC22.2■■□□□ 1.14
ARVCFO00192 RNF146-204ENST00000476956 884 ntTSL 2 BASIC22.2■■□□□ 1.14
ARVCFO00192 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.2■■□□□ 1.14
ARVCFO00192 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.2■■□□□ 1.14
ARVCFO00192 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.2■■□□□ 1.14
ARVCFO00192 AC073508.3-201ENST00000619697 1419 ntBASIC22.2■■□□□ 1.14
ARVCFO00192 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ARVCFO00192 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
ARVCFO00192 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.2■■□□□ 1.14
ARVCFO00192 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
ARVCFO00192 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
ARVCFO00192 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
ARVCFO00192 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
ARVCFO00192 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms