Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.29■■□□□ 1.32
LOC285556D6RIA3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
LOC285556D6RIA3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.29■■□□□ 1.32
LOC285556D6RIA3 AL355355.2-201ENST00000442321 338 ntBASIC23.29■■□□□ 1.32
LOC285556D6RIA3 AC145285.6-201ENST00000604632 637 ntBASIC23.29■■□□□ 1.32
LOC285556D6RIA3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
LOC285556D6RIA3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LOC285556D6RIA3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LOC285556D6RIA3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
LOC285556D6RIA3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.28■■□□□ 1.32
LOC285556D6RIA3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LOC285556D6RIA3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.28■■□□□ 1.32
LOC285556D6RIA3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC23.28■■□□□ 1.32
LOC285556D6RIA3 AL031963.3-201ENST00000606441 850 ntBASIC23.28■■□□□ 1.32
LOC285556D6RIA3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.28■■□□□ 1.32
LOC285556D6RIA3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
LOC285556D6RIA3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
LOC285556D6RIA3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LOC285556D6RIA3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LOC285556D6RIA3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LOC285556D6RIA3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LOC285556D6RIA3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
LOC285556D6RIA3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.28■■□□□ 1.32
LOC285556D6RIA3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LOC285556D6RIA3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LOC285556D6RIA3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LOC285556D6RIA3 UNC93B2-201ENST00000285383 730 ntBASIC23.27■■□□□ 1.32
LOC285556D6RIA3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LOC285556D6RIA3 AL390955.1-201ENST00000428694 934 ntBASIC23.27■■□□□ 1.32
LOC285556D6RIA3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LOC285556D6RIA3 AC073195.1-201ENST00000607241 877 ntBASIC23.27■■□□□ 1.32
LOC285556D6RIA3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
LOC285556D6RIA3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
LOC285556D6RIA3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
LOC285556D6RIA3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LOC285556D6RIA3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
LOC285556D6RIA3 KRT16P1-201ENST00000399124 1418 ntBASIC23.27■■□□□ 1.32
LOC285556D6RIA3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LOC285556D6RIA3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LOC285556D6RIA3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
LOC285556D6RIA3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LOC285556D6RIA3 AC113347.1-201ENST00000413321 391 ntBASIC23.27■■□□□ 1.32
LOC285556D6RIA3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LOC285556D6RIA3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.27■■□□□ 1.32
LOC285556D6RIA3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LOC285556D6RIA3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LOC285556D6RIA3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC23.27■■□□□ 1.31
LOC285556D6RIA3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
LOC285556D6RIA3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LOC285556D6RIA3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LOC285556D6RIA3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.26■■□□□ 1.31
LOC285556D6RIA3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.26■■□□□ 1.31
LOC285556D6RIA3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.26■■□□□ 1.31
LOC285556D6RIA3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
LOC285556D6RIA3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
LOC285556D6RIA3 MMP23A-201ENST00000234610 1017 ntBASIC23.26■■□□□ 1.31
LOC285556D6RIA3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
LOC285556D6RIA3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
LOC285556D6RIA3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LOC285556D6RIA3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LOC285556D6RIA3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LOC285556D6RIA3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LOC285556D6RIA3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC23.25■■□□□ 1.31
LOC285556D6RIA3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
LOC285556D6RIA3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LOC285556D6RIA3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC23.25■■□□□ 1.31
LOC285556D6RIA3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LOC285556D6RIA3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LOC285556D6RIA3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
LOC285556D6RIA3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.25■■□□□ 1.31
LOC285556D6RIA3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.25■■□□□ 1.31
LOC285556D6RIA3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LOC285556D6RIA3 DUT-205ENST00000558813 769 ntTSL 2 BASIC23.25■■□□□ 1.31
LOC285556D6RIA3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.25■■□□□ 1.31
LOC285556D6RIA3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.25■■□□□ 1.31
LOC285556D6RIA3 AP000525.1-201ENST00000608286 694 ntBASIC23.25■■□□□ 1.31
LOC285556D6RIA3 AC092865.7-201ENST00000641832 219 ntBASIC23.25■■□□□ 1.31
LOC285556D6RIA3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LOC285556D6RIA3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LOC285556D6RIA3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LOC285556D6RIA3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LOC285556D6RIA3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LOC285556D6RIA3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LOC285556D6RIA3 KRT18P35-201ENST00000510488 1269 ntBASIC23.24■■□□□ 1.31
LOC285556D6RIA3 C1QL1P1-201ENST00000568105 661 ntBASIC23.24■■□□□ 1.31
LOC285556D6RIA3 AC004264.1-201ENST00000608354 794 ntBASIC23.24■■□□□ 1.31
LOC285556D6RIA3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.24■■□□□ 1.31
LOC285556D6RIA3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
LOC285556D6RIA3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
LOC285556D6RIA3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LOC285556D6RIA3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LOC285556D6RIA3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LOC285556D6RIA3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC23.24■■□□□ 1.31
LOC285556D6RIA3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LOC285556D6RIA3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LOC285556D6RIA3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LOC285556D6RIA3 AC116562.2-201ENST00000507042 360 ntBASIC23.24■■□□□ 1.31
LOC285556D6RIA3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
LOC285556D6RIA3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.23■■□□□ 1.31
LOC285556D6RIA3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms