Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 AC099791.2-201ENST00000605725 427 ntBASIC14.32□□□□□ -0.12
LINC01549A6NIU2 MIR6724-1-201ENST00000616420 92 ntBASIC14.32□□□□□ -0.12
LINC01549A6NIU2 MIR6724-2-201ENST00000616483 92 ntBASIC14.32□□□□□ -0.12
LINC01549A6NIU2 MIR6724-4-201ENST00000617390 92 ntBASIC14.32□□□□□ -0.12
LINC01549A6NIU2 MIR6724-3-201ENST00000622482 92 ntBASIC14.32□□□□□ -0.12
LINC01549A6NIU2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LINC01549A6NIU2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 AP004607.4-201ENST00000530158 1459 ntBASIC14.31□□□□□ -0.12
LINC01549A6NIU2 Z82202.1-201ENST00000623446 1880 ntBASIC14.31□□□□□ -0.12
LINC01549A6NIU2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 HSD17B1P1-201ENST00000590052 955 ntBASIC14.31□□□□□ -0.12
LINC01549A6NIU2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01549A6NIU2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LINC01549A6NIU2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01549A6NIU2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC01549A6NIU2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC01549A6NIU2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LINC01549A6NIU2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01549A6NIU2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LINC01549A6NIU2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01549A6NIU2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01549A6NIU2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01549A6NIU2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC01549A6NIU2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01549A6NIU2 AL138724.1-201ENST00000606771 1088 ntBASIC14.3□□□□□ -0.12
LINC01549A6NIU2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC01549A6NIU2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LINC01549A6NIU2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
LINC01549A6NIU2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01549A6NIU2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01549A6NIU2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LINC01549A6NIU2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01549A6NIU2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 MIR4787-201ENST00000607364 84 ntBASIC14.29□□□□□ -0.12
LINC01549A6NIU2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 KRT8P33-201ENST00000508125 1423 ntBASIC14.29□□□□□ -0.12
LINC01549A6NIU2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01549A6NIU2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms