Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01546A6NGU7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.27□□□□□ -0.12
LINC01546A6NGU7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01546A6NGU7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01546A6NGU7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01546A6NGU7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC01546A6NGU7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC01546A6NGU7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01546A6NGU7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
LINC01546A6NGU7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01546A6NGU7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01546A6NGU7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01546A6NGU7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01546A6NGU7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01546A6NGU7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC01546A6NGU7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC01546A6NGU7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01546A6NGU7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.26□□□□□ -0.13
LINC01546A6NGU7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 KRT8P36-201ENST00000489121 1440 ntBASIC14.26□□□□□ -0.13
LINC01546A6NGU7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 SLC47A1P1-202ENST00000449666 945 ntBASIC14.26□□□□□ -0.13
LINC01546A6NGU7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 AL138724.1-201ENST00000606771 1088 ntBASIC14.26□□□□□ -0.13
LINC01546A6NGU7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 RARRES2P11-201ENST00000635158 484 ntBASIC14.26□□□□□ -0.13
LINC01546A6NGU7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.26□□□□□ -0.13
LINC01546A6NGU7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01546A6NGU7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 AC009113.1-201ENST00000570267 2443 ntBASIC14.24□□□□□ -0.13
LINC01546A6NGU7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 AC005224.4-201ENST00000583262 1652 ntBASIC14.24□□□□□ -0.13
LINC01546A6NGU7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01546A6NGU7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms