Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
PRAMEF25A6NGN4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.92■□□□□ 0.62
PRAMEF25A6NGN4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF25A6NGN4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF25A6NGN4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF25A6NGN4 AC116050.2-201ENST00000612102 1779 ntBASIC18.92■□□□□ 0.62
PRAMEF25A6NGN4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF25A6NGN4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF25A6NGN4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.92■□□□□ 0.62
PRAMEF25A6NGN4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.92■□□□□ 0.62
PRAMEF25A6NGN4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.92■□□□□ 0.62
PRAMEF25A6NGN4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.92■□□□□ 0.62
PRAMEF25A6NGN4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF25A6NGN4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF25A6NGN4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
PRAMEF25A6NGN4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF25A6NGN4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.91■□□□□ 0.62
PRAMEF25A6NGN4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF25A6NGN4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF25A6NGN4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PRAMEF25A6NGN4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PRAMEF25A6NGN4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PRAMEF25A6NGN4 FAM21FP-204ENST00000608637 956 ntBASIC18.91■□□□□ 0.62
PRAMEF25A6NGN4 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.91■□□□□ 0.62
PRAMEF25A6NGN4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.91■□□□□ 0.62
PRAMEF25A6NGN4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.91■□□□□ 0.62
PRAMEF25A6NGN4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF25A6NGN4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF25A6NGN4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF25A6NGN4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF25A6NGN4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.9■□□□□ 0.62
PRAMEF25A6NGN4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF25A6NGN4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF25A6NGN4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF25A6NGN4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF25A6NGN4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF25A6NGN4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF25A6NGN4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF25A6NGN4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.9■□□□□ 0.62
PRAMEF25A6NGN4 RARRES2P4-201ENST00000514074 484 ntBASIC18.9■□□□□ 0.62
PRAMEF25A6NGN4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.9■□□□□ 0.62
PRAMEF25A6NGN4 OR10C1-204ENST00000622521 1039 ntBASIC18.9■□□□□ 0.62
PRAMEF25A6NGN4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.9■□□□□ 0.62
PRAMEF25A6NGN4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF25A6NGN4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.9■□□□□ 0.62
PRAMEF25A6NGN4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PRAMEF25A6NGN4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF25A6NGN4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF25A6NGN4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PRAMEF25A6NGN4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PRAMEF25A6NGN4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
PRAMEF25A6NGN4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PRAMEF25A6NGN4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 NCF1B-203ENST00000435988 1254 ntBASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 AC133552.2-202ENST00000575694 574 ntBASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 AL121832.2-201ENST00000610979 668 ntBASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 AC125437.2-201ENST00000625180 2167 ntBASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF25A6NGN4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 SMG8-203ENST00000578922 2178 ntBASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 AF201337.1-201ENST00000520239 748 ntBASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 AC105036.2-201ENST00000569468 176 ntBASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 MIR2861-201ENST00000636310 90 ntBASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF25A6NGN4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms