Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
TBC1D3BA6NDS4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.54■□□□□ 0.88
TBC1D3BA6NDS4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3BA6NDS4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.54■□□□□ 0.88
TBC1D3BA6NDS4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3BA6NDS4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3BA6NDS4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3BA6NDS4 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.54■□□□□ 0.88
TBC1D3BA6NDS4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.54■□□□□ 0.88
TBC1D3BA6NDS4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TBC1D3BA6NDS4 AC073912.3-201ENST00000624414 853 ntBASIC20.54■□□□□ 0.88
TBC1D3BA6NDS4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.54■□□□□ 0.88
TBC1D3BA6NDS4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.54■□□□□ 0.88
TBC1D3BA6NDS4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3BA6NDS4 KRT17P2-201ENST00000300992 1314 ntBASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 TSPY7P-201ENST00000431358 1114 ntBASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 AL049637.2-201ENST00000641778 930 ntBASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3BA6NDS4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D3BA6NDS4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D3BA6NDS4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D3BA6NDS4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D3BA6NDS4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.52■□□□□ 0.88
TBC1D3BA6NDS4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D3BA6NDS4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.52■□□□□ 0.88
TBC1D3BA6NDS4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D3BA6NDS4 AL121829.2-201ENST00000620908 328 ntBASIC20.52■□□□□ 0.88
TBC1D3BA6NDS4 REXO1L12P-201ENST00000622156 912 ntBASIC20.52■□□□□ 0.88
TBC1D3BA6NDS4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
TBC1D3BA6NDS4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D3BA6NDS4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D3BA6NDS4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D3BA6NDS4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D3BA6NDS4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TBC1D3BA6NDS4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3BA6NDS4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms