Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV25A0A0B4J276 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 AL158211.5-201ENST00000623583 2518 ntBASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 CD99P1-205ENST00000527459 561 ntBASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV25A0A0B4J276 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 AC092368.3-202ENST00000574180 1591 ntBASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 PNMA6B-201ENST00000538162 1200 ntBASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV25A0A0B4J276 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 RNA5SP413-201ENST00000516373 109 ntBASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV25A0A0B4J276 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms