Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 AC131212.1-201ENST00000613771 668 ntBASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 KRT87P-202ENST00000534226 1464 ntBASIC15.65■□□□□ 0.1
TRAV5A0A0B4J249 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 AP000974.1-201ENST00000623909 2387 ntBASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 EDA-201ENST00000338901 1233 ntBASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 MIR939-201ENST00000401314 82 ntBASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 KRT16P2-201ENST00000414673 1423 ntBASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 AL355001.2-201ENST00000620617 1191 ntBASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV5A0A0B4J249 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 AC120498.10-201ENST00000621827 505 ntBASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 MIR6084-201ENST00000622012 110 ntBASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 AIRN-201ENST00000601203 4374 ntBASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 AC138932.1-201ENST00000534164 6830 ntBASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV5A0A0B4J249 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 BX323043.1-201ENST00000641006 1765 ntBASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 SLC7A5P2-201ENST00000553010 536 ntBASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 AC138907.5-202ENST00000569484 235 ntBASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV5A0A0B4J249 AC120498.9-201ENST00000339021 3867 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms