Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC8.22□□□□□ -1.09
SLC1A1P43005 AC130464.1-201ENST00000416201 1500 ntBASIC8.22□□□□□ -1.09
SLC1A1P43005 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
SLC1A1P43005 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
SLC1A1P43005 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC8.22□□□□□ -1.09
SLC1A1P43005 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SLC1A1P43005 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SLC1A1P43005 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SLC1A1P43005 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.09
SLC1A1P43005 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SLC1A1P43005 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC8.21□□□□□ -1.09
SLC1A1P43005 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC8.21□□□□□ -1.09
SLC1A1P43005 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
SLC1A1P43005 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
SLC1A1P43005 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC8.21□□□□□ -1.09
SLC1A1P43005 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC8.21□□□□□ -1.09
SLC1A1P43005 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SLC1A1P43005 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SLC1A1P43005 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SLC1A1P43005 CAMK2D-213ENST00000514328 1497 ntTSL 5 BASIC8.21□□□□□ -1.09
SLC1A1P43005 LINC01800-201ENST00000445865 1977 ntTSL 2 BASIC8.21□□□□□ -1.09
SLC1A1P43005 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC8.21□□□□□ -1.09
SLC1A1P43005 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
SLC1A1P43005 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SLC1A1P43005 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC8.21□□□□□ -1.1
SLC1A1P43005 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC8.21□□□□□ -1.1
SLC1A1P43005 PSG9-203ENST00000291752 1055 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SLC1A1P43005 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SLC1A1P43005 ST13P13-201ENST00000417082 1092 ntBASIC8.21□□□□□ -1.1
SLC1A1P43005 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC8.21□□□□□ -1.1
SLC1A1P43005 FTH1P5-201ENST00000425761 545 ntBASIC8.21□□□□□ -1.1
SLC1A1P43005 AL954705.1-201ENST00000435277 559 ntBASIC8.21□□□□□ -1.1
SLC1A1P43005 AC092568.1-201ENST00000440950 1284 ntBASIC8.21□□□□□ -1.1
SLC1A1P43005 AC008638.2-201ENST00000503840 715 ntBASIC8.21□□□□□ -1.1
SLC1A1P43005 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC8.21□□□□□ -1.1
SLC1A1P43005 LINC02058-201ENST00000507491 707 ntTSL 3 BASIC8.21□□□□□ -1.1
SLC1A1P43005 AC091820.1-201ENST00000523497 648 ntTSL 4 BASIC8.21□□□□□ -1.1
SLC1A1P43005 LINC01490-201ENST00000548705 638 ntTSL 3 BASIC8.21□□□□□ -1.1
SLC1A1P43005 AC012038.1-201ENST00000551279 552 ntTSL 4 BASIC8.21□□□□□ -1.1
SLC1A1P43005 AC005230.1-201ENST00000555418 285 ntBASIC8.21□□□□□ -1.1
SLC1A1P43005 FDPSP3-201ENST00000556903 1013 ntBASIC8.21□□□□□ -1.1
SLC1A1P43005 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC8.21□□□□□ -1.1
SLC1A1P43005 AC098850.2-201ENST00000578710 686 ntTSL 5 BASIC8.21□□□□□ -1.1
SLC1A1P43005 MIR3714-201ENST00000579507 65 ntBASIC8.21□□□□□ -1.1
SLC1A1P43005 RN7SL473P-201ENST00000580341 299 ntBASIC8.21□□□□□ -1.1
SLC1A1P43005 AL133351.5-201ENST00000612789 106 ntBASIC8.21□□□□□ -1.1
SLC1A1P43005 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SLC1A1P43005 AP003499.3-201ENST00000624680 857 ntBASIC8.21□□□□□ -1.1
SLC1A1P43005 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC8.21□□□□□ -1.1
SLC1A1P43005 MAPK10-281ENST00000641170 3070 ntBASIC8.21□□□□□ -1.1
SLC1A1P43005 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC8.21□□□□□ -1.1
SLC1A1P43005 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SLC1A1P43005 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
SLC1A1P43005 CDV3-209ENST00000515421 1305 ntTSL 3 BASIC8.21□□□□□ -1.1
SLC1A1P43005 FHL1-230ENST00000630084 1335 ntTSL 2 BASIC8.21□□□□□ -1.1
SLC1A1P43005 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC8.21□□□□□ -1.1
SLC1A1P43005 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
SLC1A1P43005 EML5-201ENST00000380664 5910 ntTSL 5 BASIC8.21□□□□□ -1.1
SLC1A1P43005 RERE-203ENST00000400907 2973 ntTSL 5 BASIC8.21□□□□□ -1.1
SLC1A1P43005 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC8.21□□□□□ -1.1
SLC1A1P43005 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SLC1A1P43005 AC096745.2-201ENST00000627783 1914 ntBASIC8.21□□□□□ -1.1
SLC1A1P43005 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SLC1A1P43005 LRRC2-AS1-201ENST00000599511 2291 ntBASIC8.2□□□□□ -1.1
SLC1A1P43005 CASC19-205ENST00000641013 1411 ntBASIC8.2□□□□□ -1.1
SLC1A1P43005 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
SLC1A1P43005 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.2□□□□□ -1.1
SLC1A1P43005 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SLC1A1P43005 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.2□□□□□ -1.1
SLC1A1P43005 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
SLC1A1P43005 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
SLC1A1P43005 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
SLC1A1P43005 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SLC1A1P43005 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SLC1A1P43005 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
SLC1A1P43005 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
SLC1A1P43005 TAC1-203ENST00000350485 975 ntTSL 5 BASIC8.2□□□□□ -1.1
SLC1A1P43005 PHF6-203ENST00000370800 1150 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SLC1A1P43005 TRAV17-201ENST00000390445 484 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
SLC1A1P43005 RN7SKP207-201ENST00000411204 303 ntBASIC8.2□□□□□ -1.1
SLC1A1P43005 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC8.2□□□□□ -1.1
SLC1A1P43005 RBMY2GP-201ENST00000418671 1034 ntBASIC8.2□□□□□ -1.1
SLC1A1P43005 OR7E36P-201ENST00000419933 954 ntBASIC8.2□□□□□ -1.1
SLC1A1P43005 KCNQ5-AS1-201ENST00000429832 1101 ntTSL 5 BASIC8.2□□□□□ -1.1
SLC1A1P43005 AL359094.1-210ENST00000432554 730 ntTSL 3 BASIC8.2□□□□□ -1.1
SLC1A1P43005 RBMY2NP-201ENST00000434454 1028 ntBASIC8.2□□□□□ -1.1
SLC1A1P43005 RBM22P5-201ENST00000449536 1277 ntBASIC8.2□□□□□ -1.1
SLC1A1P43005 AC013439.1-201ENST00000449965 1239 ntBASIC8.2□□□□□ -1.1
SLC1A1P43005 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC8.2□□□□□ -1.1
SLC1A1P43005 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC8.2□□□□□ -1.1
SLC1A1P43005 RN7SL740P-201ENST00000467060 344 ntBASIC8.2□□□□□ -1.1
SLC1A1P43005 RPL7AP26-201ENST00000488538 813 ntBASIC8.2□□□□□ -1.1
SLC1A1P43005 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC8.2□□□□□ -1.1
SLC1A1P43005 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
SLC1A1P43005 AC015722.1-201ENST00000557499 385 ntTSL 3 BASIC8.2□□□□□ -1.1
SLC1A1P43005 C16orf45-203ENST00000561692 534 ntTSL 3 BASIC8.2□□□□□ -1.1
SLC1A1P43005 GATA6-AS1-201ENST00000579431 481 ntTSL 3 BASIC8.2□□□□□ -1.1
SLC1A1P43005 AP001020.1-201ENST00000579595 464 ntTSL 3 BASIC8.2□□□□□ -1.1
SLC1A1P43005 AP002856.2-202ENST00000606885 755 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SLC1A1P43005 AL022324.3-201ENST00000609330 747 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms