Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.239e-6■■□□□ 12.6
PRPF8Q6P2Q9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.5■□□□□ 0.235e-8■■□□□ 12.6
PRPF8Q6P2Q9 MAPK7-205ENST00000443215 850 ntTSL 316.5■□□□□ 0.239e-6■■□□□ 12.6
PRPF8Q6P2Q9 MAPK7-216ENST00000579284 615 ntTSL 416.32■□□□□ 0.29e-6■■□□□ 12.6
PRPF8Q6P2Q9 C19orf12-202ENST00000342680 578 ntTSL 516.31■□□□□ 0.29e-6■■□□□ 12.6
PRPF8Q6P2Q9 B4GALT7-202ENST00000502420 1305 ntTSL 516.26■□□□□ 0.199e-6■■□□□ 12.6
PRPF8Q6P2Q9 PPP2R1B-209ENST00000531373 553 ntTSL 416.25■□□□□ 0.193e-8■■□□□ 12.6
PRPF8Q6P2Q9 PTP4A2-212ENST00000529477 568 ntTSL 316.22■□□□□ 0.198e-12■■□□□ 12.6
PRPF8Q6P2Q9 MTMR12-205ENST00000505419 671 ntTSL 316.16■□□□□ 0.181e-6■■□□□ 12.6
PRPF8Q6P2Q9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.189e-6■■□□□ 12.6
PRPF8Q6P2Q9 PVT1-220ENST00000524165 458 ntTSL 216.12■□□□□ 0.171e-10■■□□□ 12.6
PRPF8Q6P2Q9 IGFLR1-204ENST00000588018 1148 ntTSL 1 (best)16.06■□□□□ 0.169e-6■■□□□ 12.6
PRPF8Q6P2Q9 FLT3LG-208ENST00000598472 497 ntTSL 515.91■□□□□ 0.149e-6■■□□□ 12.6
PRPF8Q6P2Q9 TBC1D5-221ENST00000452492 581 ntTSL 315.76■□□□□ 0.119e-6■■□□□ 12.6
PRPF8Q6P2Q9 PTPN18-203ENST00000409022 993 ntTSL 315.71■□□□□ 0.119e-6■■□□□ 12.6
PRPF8Q6P2Q9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.63■□□□□ 0.093e-6■■□□□ 12.6
PRPF8Q6P2Q9 TAF6-208ENST00000451699 703 ntTSL 415.63■□□□□ 0.099e-6■■□□□ 12.6
PRPF8Q6P2Q9 KMT2A-206ENST00000527869 481 ntTSL 315.62■□□□□ 0.098e-7■■□□□ 12.6
PRPF8Q6P2Q9 MAPK7-207ENST00000486905 615 ntTSL 215.6■□□□□ 0.099e-6■■□□□ 12.6
PRPF8Q6P2Q9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.089e-6■■□□□ 12.6
PRPF8Q6P2Q9 UHRF1BP1L-204ENST00000547428 559 ntTSL 515.53■□□□□ 0.083e-8■■□□□ 12.6
PRPF8Q6P2Q9 TARBP2-204ENST00000546763 846 ntTSL 215.49■□□□□ 0.073e-8■■□□□ 12.6
PRPF8Q6P2Q9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.079e-6■■□□□ 12.6
PRPF8Q6P2Q9 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.069e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.41■□□□□ 0.069e-6■■□□□ 12.6
PRPF8Q6P2Q9 MAST3-202ENST00000601226 451 ntTSL 315.32■□□□□ 0.049e-6■■□□□ 12.6
PRPF8Q6P2Q9 TAF6-218ENST00000520135 546 ntTSL 315.31■□□□□ 0.049e-6■■□□□ 12.6
PRPF8Q6P2Q9 MAPK7-217ENST00000581260 773 ntTSL 315.28■□□□□ 0.049e-6■■□□□ 12.6
PRPF8Q6P2Q9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.28■□□□□ 0.041e-6■■□□□ 12.6
PRPF8Q6P2Q9 TMEM44-205ENST00000419280 1212 ntTSL 515.27■□□□□ 0.031e-6■■□□□ 12.6
PRPF8Q6P2Q9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC15.24■□□□□ 0.031e-6■■□□□ 12.6
PRPF8Q6P2Q9 EDC4-205ENST00000572724 516 ntTSL 415.24■□□□□ 0.033e-8■■□□□ 12.6
PRPF8Q6P2Q9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.17■□□□□ 0.029e-6■■□□□ 12.6
PRPF8Q6P2Q9 SPAG4-207ENST00000498203 687 ntTSL 515.17■□□□□ 0.022e-7■■□□□ 12.6
PRPF8Q6P2Q9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.14■□□□□ 0.013e-8■■□□□ 12.6
PRPF8Q6P2Q9 IGFLR1-206ENST00000589175 538 ntTSL 415.1■□□□□ 0.019e-6■■□□□ 12.6
PRPF8Q6P2Q9 RIC8B-208ENST00000548914 829 ntTSL 515.1■□□□□ 0.019e-6■■□□□ 12.6
PRPF8Q6P2Q9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 09e-6■■□□□ 12.6
PRPF8Q6P2Q9 EDC4-213ENST00000577028 747 ntTSL 414.95□□□□□ -0.023e-8■■□□□ 12.6
PRPF8Q6P2Q9 MZT2A-203ENST00000427024 679 ntTSL 314.94□□□□□ -0.029e-6■■□□□ 12.6
PRPF8Q6P2Q9 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.92□□□□□ -0.029e-6■■□□□ 12.6
PRPF8Q6P2Q9 SDHAP2-201ENST00000455183 2001 ntBASIC14.9□□□□□ -0.029e-6■■□□□ 12.6
PRPF8Q6P2Q9 CRIP1-205ENST00000461556 638 ntTSL 214.87□□□□□ -0.039e-6■■□□□ 12.6
PRPF8Q6P2Q9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.86□□□□□ -0.039e-6■■□□□ 12.6
PRPF8Q6P2Q9 RIC8B-212ENST00000552619 419 ntTSL 414.83□□□□□ -0.039e-6■■□□□ 12.6
PRPF8Q6P2Q9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.83□□□□□ -0.049e-6■■□□□ 12.6
PRPF8Q6P2Q9 NDEL1-217ENST00000583683 1802 ntTSL 214.82□□□□□ -0.049e-6■■□□□ 12.6
PRPF8Q6P2Q9 MZT2B-203ENST00000425361 455 ntAPPRIS ALT2 TSL 214.78□□□□□ -0.043e-8■■□□□ 12.6
PRPF8Q6P2Q9 MAPK7-213ENST00000572968 556 ntTSL 414.76□□□□□ -0.059e-6■■□□□ 12.6
PRPF8Q6P2Q9 MAPK7-218ENST00000603493 582 ntTSL 514.76□□□□□ -0.059e-6■■□□□ 12.6
PRPF8Q6P2Q9 MZT2B-204ENST00000455239 401 ntAPPRIS ALT2 TSL 214.7□□□□□ -0.063e-8■■□□□ 12.6
PRPF8Q6P2Q9 MZT2A-202ENST00000410036 382 ntTSL 514.69□□□□□ -0.069e-6■■□□□ 12.6
PRPF8Q6P2Q9 FLT3LG-207ENST00000597914 1161 ntTSL 1 (best)14.69□□□□□ -0.069e-6■■□□□ 12.6
PRPF8Q6P2Q9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.6□□□□□ -0.079e-6■■□□□ 12.6
PRPF8Q6P2Q9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.59□□□□□ -0.073e-6■■□□□ 12.6
PRPF8Q6P2Q9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.079e-6■■□□□ 12.6
PRPF8Q6P2Q9 PLEKHN1-205ENST00000491024 698 ntTSL 314.58□□□□□ -0.089e-6■■□□□ 12.6
PRPF8Q6P2Q9 TAF6-202ENST00000417349 537 ntTSL 414.57□□□□□ -0.089e-6■■□□□ 12.6
PRPF8Q6P2Q9 CEP72-203ENST00000512038 656 ntTSL 214.52□□□□□ -0.083e-8■■□□□ 12.6
PRPF8Q6P2Q9 LYSMD4-209ENST00000496108 2222 ntTSL 214.5□□□□□ -0.099e-6■■□□□ 12.6
PRPF8Q6P2Q9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.19e-6■■□□□ 12.6
PRPF8Q6P2Q9 ACAP3-207ENST00000470659 421 ntTSL 314.27□□□□□ -0.121e-9■■□□□ 12.6
PRPF8Q6P2Q9 LINC00969-207ENST00000429897 2131 ntTSL 214.25□□□□□ -0.139e-6■■□□□ 12.6
PRPF8Q6P2Q9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.23□□□□□ -0.139e-6■■□□□ 12.6
PRPF8Q6P2Q9 IPO5-210ENST00000471898 556 ntTSL 414.15□□□□□ -0.148e-12■■□□□ 12.6
PRPF8Q6P2Q9 DBNDD1-205ENST00000568662 563 ntTSL 214.14□□□□□ -0.159e-6■■□□□ 12.6
PRPF8Q6P2Q9 MEGF8-205ENST00000593840 536 ntTSL 414.14□□□□□ -0.159e-6■■□□□ 12.6
PRPF8Q6P2Q9 FLT3LG-209ENST00000598555 591 ntTSL 314.06□□□□□ -0.169e-6■■□□□ 12.6
PRPF8Q6P2Q9 RPP14-203ENST00000461797 531 ntTSL 414.03□□□□□ -0.169e-6■■□□□ 12.6
PRPF8Q6P2Q9 SLC27A5-205ENST00000595851 2003 ntTSL 213.98□□□□□ -0.179e-6■■□□□ 12.6
PRPF8Q6P2Q9 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.179e-6■■□□□ 12.6
PRPF8Q6P2Q9 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.95□□□□□ -0.189e-6■■□□□ 12.6
PRPF8Q6P2Q9 LASP1-206ENST00000579123 1874 ntTSL 213.87□□□□□ -0.199e-6■■□□□ 12.6
PRPF8Q6P2Q9 PIGL-211ENST00000580201 551 ntTSL 413.86□□□□□ -0.191e-10■■□□□ 12.6
PRPF8Q6P2Q9 ASCC2-219ENST00000487486 1596 ntTSL 213.82□□□□□ -0.29e-6■■□□□ 12.6
PRPF8Q6P2Q9 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.219e-6■■□□□ 12.6
PRPF8Q6P2Q9 IL4R-204ENST00000561742 379 ntTSL 313.75□□□□□ -0.219e-6■■□□□ 12.6
PRPF8Q6P2Q9 B4GALT7-205ENST00000505468 544 ntTSL 513.74□□□□□ -0.219e-6■■□□□ 12.6
PRPF8Q6P2Q9 EIF3H-208ENST00000520813 562 ntTSL 413.74□□□□□ -0.219e-6■■□□□ 12.6
PRPF8Q6P2Q9 MTMR12-207ENST00000513622 561 ntTSL 413.72□□□□□ -0.211e-6■■□□□ 12.6
PRPF8Q6P2Q9 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.72□□□□□ -0.219e-6■■□□□ 12.6
PRPF8Q6P2Q9 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.229e-6■■□□□ 12.6
PRPF8Q6P2Q9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.239e-6■■□□□ 12.6
PRPF8Q6P2Q9 ATG4D-205ENST00000586477 628 ntTSL 513.62□□□□□ -0.239e-6■■□□□ 12.6
PRPF8Q6P2Q9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.249e-6■■□□□ 12.6
PRPF8Q6P2Q9 ALDH2-204ENST00000549106 580 ntTSL 313.52□□□□□ -0.259e-6■■□□□ 12.6
PRPF8Q6P2Q9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.5□□□□□ -0.259e-6■■□□□ 12.6
PRPF8Q6P2Q9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.269e-6■■□□□ 12.6
PRPF8Q6P2Q9 CHMP1A-204ENST00000547687 2007 ntTSL 1 (best)13.4□□□□□ -0.269e-6■■□□□ 12.6
PRPF8Q6P2Q9 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.4□□□□□ -0.269e-6■■□□□ 12.6
PRPF8Q6P2Q9 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.279e-6■■□□□ 12.6
PRPF8Q6P2Q9 FLT3LG-212ENST00000601800 1032 ntTSL 513.38□□□□□ -0.279e-6■■□□□ 12.6
PRPF8Q6P2Q9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.283e-8■■□□□ 12.6
PRPF8Q6P2Q9 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.29□□□□□ -0.289e-6■■□□□ 12.6
PRPF8Q6P2Q9 NLRX1-211ENST00000481860 2585 ntTSL 213.28□□□□□ -0.289e-6■■□□□ 12.6
PRPF8Q6P2Q9 XRCC1-209ENST00000599693 628 ntTSL 313.26□□□□□ -0.299e-6■■□□□ 12.6
PRPF8Q6P2Q9 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.24□□□□□ -0.291e-10■■□□□ 12.6
PRPF8Q6P2Q9 C6orf136-213ENST00000493705 715 ntTSL 513.18□□□□□ -0.31e-10■■□□□ 12.6
PRPF8Q6P2Q9 CUL9-212ENST00000508656 882 ntTSL 513.17□□□□□ -0.39e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF248-206ENST00000485560 1705 ntTSL 1 (best)13.15□□□□□ -0.39e-6■■□□□ 12.6
Retrieved 100 of 73,762 protein–RNA pairs in 627.1 ms