Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 FDPSP3-201ENST00000556903 1013 ntBASIC8.41□□□□□ -1.06
LMO3Q8TAP4 LINC00674-202ENST00000590734 160 ntBASIC8.41□□□□□ -1.06
LMO3Q8TAP4 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 AL731533.2-201ENST00000607898 578 ntBASIC8.41□□□□□ -1.06
LMO3Q8TAP4 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 THAP12P7-201ENST00000520248 2290 ntBASIC8.41□□□□□ -1.06
LMO3Q8TAP4 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 ARHGAP42P5-201ENST00000548856 2936 ntBASIC8.4□□□□□ -1.06
LMO3Q8TAP4 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 SLC16A1P1-201ENST00000486743 1510 ntBASIC8.4□□□□□ -1.06
LMO3Q8TAP4 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 MAPK10-313ENST00000641405 2469 ntBASIC8.4□□□□□ -1.06
LMO3Q8TAP4 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 COLGALT2-202ENST00000367520 2325 ntTSL 2 BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 AL512662.1-201ENST00000624850 2251 ntBASIC8.4□□□□□ -1.06
LMO3Q8TAP4 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 RPL19P21-201ENST00000424919 591 ntBASIC8.4□□□□□ -1.06
LMO3Q8TAP4 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 ZNF195-208ENST00000438262 1018 ntTSL 3 BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 CICP10-201ENST00000439497 198 ntBASIC8.4□□□□□ -1.06
LMO3Q8TAP4 AC239860.1-201ENST00000444680 1270 ntBASIC8.4□□□□□ -1.06
LMO3Q8TAP4 AL135929.1-201ENST00000449287 552 ntBASIC8.4□□□□□ -1.06
LMO3Q8TAP4 RN7SL587P-201ENST00000459853 281 ntBASIC8.4□□□□□ -1.06
LMO3Q8TAP4 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 TUBD1-206ENST00000539018 1027 ntTSL 2 BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 TMEM106C-219ENST00000552546 742 ntTSL 4 BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 AL356019.2-201ENST00000556738 3829 ntBASIC8.4□□□□□ -1.06
LMO3Q8TAP4 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 AL451054.3-201ENST00000611115 776 ntBASIC8.4□□□□□ -1.06
LMO3Q8TAP4 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 AP003972.1-201ENST00000625192 5446 ntBASIC8.4□□□□□ -1.06
LMO3Q8TAP4 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 AC131392.2-201ENST00000505635 4332 ntBASIC8.4□□□□□ -1.06
LMO3Q8TAP4 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
LMO3Q8TAP4 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
LMO3Q8TAP4 AC051619.3-201ENST00000560646 2426 ntBASIC8.4□□□□□ -1.07
LMO3Q8TAP4 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
LMO3Q8TAP4 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 AC130464.1-201ENST00000416201 1500 ntBASIC8.39□□□□□ -1.07
LMO3Q8TAP4 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 NVL-212ENST00000469968 2510 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 SCGB2A2-201ENST00000227918 505 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 OR13H1-201ENST00000338616 927 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 OR1J4-201ENST00000340750 942 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 SSX9-201ENST00000376909 591 ntBASIC8.39□□□□□ -1.07
LMO3Q8TAP4 GZMB-203ENST00000382542 666 ntTSL 2 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 SNORA70I-201ENST00000384544 135 ntBASIC8.39□□□□□ -1.07
LMO3Q8TAP4 MAML3-201ENST00000398940 831 ntTSL 5 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 PKMP3-201ENST00000405497 715 ntBASIC8.39□□□□□ -1.07
LMO3Q8TAP4 AL590240.2-201ENST00000413370 894 ntBASIC8.39□□□□□ -1.07
LMO3Q8TAP4 AC002367.1-201ENST00000416765 405 ntBASIC8.39□□□□□ -1.07
LMO3Q8TAP4 C2orf74-202ENST00000426997 879 ntAPPRIS P2 TSL 3 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 LINC01865-202ENST00000436808 853 ntTSL 5 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 EFCAB14P1-201ENST00000442409 463 ntBASIC8.39□□□□□ -1.07
LMO3Q8TAP4 SERPINA7P1-201ENST00000443077 631 ntBASIC8.39□□□□□ -1.07
LMO3Q8TAP4 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 AC245047.6-201ENST00000445444 617 ntBASIC8.39□□□□□ -1.07
LMO3Q8TAP4 AC104389.2-201ENST00000450768 887 ntBASIC8.39□□□□□ -1.07
LMO3Q8TAP4 PRMT8-203ENST00000452611 1204 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms