Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 RN7SL840P-201ENST00000606883 284 ntBASIC8.33□□□□□ -1.08
SLC1A1P43005 AC020904.2-202ENST00000614660 1401 ntBASIC8.33□□□□□ -1.08
SLC1A1P43005 KRTAP7-1-201ENST00000621162 721 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
SLC1A1P43005 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC8.33□□□□□ -1.08
SLC1A1P43005 FAAHP1-207ENST00000635606 398 ntTSL 3 BASIC8.33□□□□□ -1.08
SLC1A1P43005 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
SLC1A1P43005 FAM240B-202ENST00000637691 966 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
SLC1A1P43005 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC8.33□□□□□ -1.08
SLC1A1P43005 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC8.33□□□□□ -1.08
SLC1A1P43005 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC8.33□□□□□ -1.08
SLC1A1P43005 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 TAOK3-209ENST00000537952 2147 ntTSL 2 BASIC8.33□□□□□ -1.08
SLC1A1P43005 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC8.33□□□□□ -1.08
SLC1A1P43005 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
SLC1A1P43005 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.33□□□□□ -1.08
SLC1A1P43005 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
SLC1A1P43005 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC8.33□□□□□ -1.08
SLC1A1P43005 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SLC1A1P43005 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SLC1A1P43005 HSP90AB2P-201ENST00000507090 2176 ntBASIC8.32□□□□□ -1.08
SLC1A1P43005 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
SLC1A1P43005 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SLC1A1P43005 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC8.32□□□□□ -1.08
SLC1A1P43005 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SLC1A1P43005 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
SLC1A1P43005 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC8.32□□□□□ -1.08
SLC1A1P43005 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SLC1A1P43005 GUCY2GP-201ENST00000479705 3222 ntBASIC8.32□□□□□ -1.08
SLC1A1P43005 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
SLC1A1P43005 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC8.32□□□□□ -1.08
SLC1A1P43005 OR2A20P-201ENST00000479887 2913 ntBASIC8.32□□□□□ -1.08
SLC1A1P43005 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
SLC1A1P43005 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
SLC1A1P43005 AL080285.1-201ENST00000404225 984 ntBASIC8.32□□□□□ -1.08
SLC1A1P43005 RN7SKP261-201ENST00000410948 278 ntBASIC8.32□□□□□ -1.08
SLC1A1P43005 UQCRHP2-201ENST00000415651 288 ntBASIC8.32□□□□□ -1.08
SLC1A1P43005 LINC01425-202ENST00000430060 760 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SLC1A1P43005 LSMEM1-202ENST00000439068 730 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
SLC1A1P43005 RPL37A-204ENST00000441179 529 ntTSL 5 BASIC8.32□□□□□ -1.08
SLC1A1P43005 NDUFB11P1-201ENST00000455818 465 ntBASIC8.32□□□□□ -1.08
SLC1A1P43005 SEC22A-210ENST00000492595 972 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SLC1A1P43005 RN7SL416P-201ENST00000494042 298 ntBASIC8.32□□□□□ -1.08
SLC1A1P43005 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC8.32□□□□□ -1.08
SLC1A1P43005 AC091839.1-201ENST00000513087 269 ntBASIC8.32□□□□□ -1.08
SLC1A1P43005 AC024022.1-203ENST00000515392 478 ntTSL 3 BASIC8.32□□□□□ -1.08
SLC1A1P43005 C14orf159-210ENST00000518665 959 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SLC1A1P43005 MTND6P20-201ENST00000522986 418 ntBASIC8.32□□□□□ -1.08
SLC1A1P43005 SNRPCP14-201ENST00000524498 205 ntBASIC8.32□□□□□ -1.08
SLC1A1P43005 AC048344.2-201ENST00000547280 147 ntBASIC8.32□□□□□ -1.08
SLC1A1P43005 AC233290.2-201ENST00000552852 390 ntBASIC8.32□□□□□ -1.08
SLC1A1P43005 AC023905.1-203ENST00000560180 765 ntTSL 5 BASIC8.32□□□□□ -1.08
SLC1A1P43005 AC138907.7-202ENST00000565347 540 ntTSL 4 BASIC8.32□□□□□ -1.08
SLC1A1P43005 AC141257.2-201ENST00000569199 540 ntTSL 5 BASIC8.32□□□□□ -1.08
SLC1A1P43005 AC005180.1-201ENST00000591137 587 ntTSL 4 BASIC8.32□□□□□ -1.08
SLC1A1P43005 AC008991.1-201ENST00000591285 537 ntTSL 4 BASIC8.32□□□□□ -1.08
SLC1A1P43005 ZNF98-205ENST00000601553 566 ntTSL 3 BASIC8.32□□□□□ -1.08
SLC1A1P43005 AL513548.2-201ENST00000602994 1207 ntBASIC8.32□□□□□ -1.08
SLC1A1P43005 TTR-204ENST00000610404 1040 ntTSL 5 BASIC8.32□□□□□ -1.08
SLC1A1P43005 TTR-205ENST00000613781 556 ntTSL 5 BASIC8.32□□□□□ -1.08
SLC1A1P43005 Metazoa_SRP.30-201ENST00000621054 280 ntBASIC8.32□□□□□ -1.08
SLC1A1P43005 LINC01358-208ENST00000634569 1030 ntTSL 5 BASIC8.32□□□□□ -1.08
SLC1A1P43005 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC8.32□□□□□ -1.08
SLC1A1P43005 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC8.32□□□□□ -1.08
SLC1A1P43005 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SLC1A1P43005 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SLC1A1P43005 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SLC1A1P43005 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC8.32□□□□□ -1.08
SLC1A1P43005 C1GALT1C1-202ENST00000371313 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SLC1A1P43005 DHRS9-202ENST00000412271 1465 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SLC1A1P43005 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SLC1A1P43005 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
SLC1A1P43005 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SLC1A1P43005 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.31□□□□□ -1.08
SLC1A1P43005 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.31□□□□□ -1.08
SLC1A1P43005 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SLC1A1P43005 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SLC1A1P43005 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
SLC1A1P43005 AL022163.1-201ENST00000430261 1569 ntBASIC8.31□□□□□ -1.08
SLC1A1P43005 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
SLC1A1P43005 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SLC1A1P43005 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
SLC1A1P43005 ADH7-205ENST00000482593 1420 ntTSL 3 BASIC8.31□□□□□ -1.08
SLC1A1P43005 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SLC1A1P43005 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC8.31□□□□□ -1.08
SLC1A1P43005 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SLC1A1P43005 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
SLC1A1P43005 RPL5P8-201ENST00000396820 815 ntBASIC8.31□□□□□ -1.08
SLC1A1P43005 AL355375.1-201ENST00000405686 392 ntBASIC8.31□□□□□ -1.08
SLC1A1P43005 PRELID1P2-201ENST00000407805 396 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms