Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 SPOP-207ENST00000504212 534 ntTSL 411.71□□□□□ -0.532e-8■■□□□ 12.8
PRPF8Q6P2Q9 SPOP-219ENST00000514121 873 ntTSL 411.65□□□□□ -0.542e-8■■□□□ 12.8
PRPF8Q6P2Q9 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.566e-6■■□□□ 12.8
PRPF8Q6P2Q9 ACP2-213ENST00000534448 2170 ntTSL 511.52□□□□□ -0.571e-6■■□□□ 12.8
PRPF8Q6P2Q9 ACP2-203ENST00000524769 727 ntTSL 311.42□□□□□ -0.583e-6■■□□□ 12.8
PRPF8Q6P2Q9 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.39□□□□□ -0.596e-6■■□□□ 12.8
PRPF8Q6P2Q9 RIC8A-209ENST00000527728 859 ntTSL 510.97□□□□□ -0.654e-8■■□□□ 12.8
PRPF8Q6P2Q9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.686e-8■■□□□ 12.8
PRPF8Q6P2Q9 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.696e-6■■□□□ 12.8
PRPF8Q6P2Q9 RAC2-207ENST00000481215 480 ntTSL 1 (best)10.12□□□□□ -0.796e-6■■□□□ 12.8
PRPF8Q6P2Q9 KCNN4-202ENST00000597184 631 ntTSL 29.81□□□□□ -0.846e-6■■□□□ 12.8
PRPF8Q6P2Q9 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.856e-8■■□□□ 12.8
PRPF8Q6P2Q9 SPOP-205ENST00000503676 1932 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.866e-6■■□□□ 12.8
PRPF8Q6P2Q9 ACP2-209ENST00000530453 826 ntTSL 2 BASIC9.68□□□□□ -0.861e-6■■□□□ 12.8
PRPF8Q6P2Q9 RAB8A-206ENST00000590899 578 ntTSL 29.17□□□□□ -0.946e-6■■□□□ 12.8
PRPF8Q6P2Q9 MPHOSPH10-204ENST00000493360 1584 ntTSL 29.1□□□□□ -0.951e-7■■□□□ 12.8
PRPF8Q6P2Q9 SPOP-202ENST00000393328 2985 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.972e-8■■□□□ 12.8
PRPF8Q6P2Q9 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -16e-6■■□□□ 12.8
PRPF8Q6P2Q9 JAK1-202ENST00000465376 814 ntTSL 38.24□□□□□ -1.092e-6■■□□□ 12.8
PRPF8Q6P2Q9 GRK2-209ENST00000530291 324 ntTSL 27.98□□□□□ -1.131e-7■■□□□ 12.8
PRPF8Q6P2Q9 RIC8A-206ENST00000527039 675 ntTSL 27.64□□□□□ -1.194e-8■■□□□ 12.8
PRPF8Q6P2Q9 GCDH-215ENST00000591050 423 ntTSL 37.6□□□□□ -1.194e-6■■□□□ 12.8
PRPF8Q6P2Q9 GPD2-213ENST00000540309 1961 ntTSL 1 (best) BASIC7.22□□□□□ -1.256e-6■■□□□ 12.8
PRPF8Q6P2Q9 ACP2-214ENST00000534752 274 ntTSL 56.94□□□□□ -1.31e-6■■□□□ 12.8
PRPF8Q6P2Q9 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.67□□□□□ -1.346e-6■■□□□ 12.8
PRPF8Q6P2Q9 MDC1-203ENST00000417033 916 ntTSL 26.6□□□□□ -1.356e-8■■□□□ 12.8
PRPF8Q6P2Q9 ATP1A1-205ENST00000440951 579 ntTSL 56.54□□□□□ -1.361e-8■■□□□ 12.8
PRPF8Q6P2Q9 ISY1-202ENST00000393292 988 ntTSL 5 BASIC6.39□□□□□ -1.396e-6■■□□□ 12.8
PRPF8Q6P2Q9 SMARCA2-236ENST00000635185 683 ntTSL 56.32□□□□□ -1.46e-6■■□□□ 12.8
PRPF8Q6P2Q9 ISY1-206ENST00000485703 837 ntTSL 56.23□□□□□ -1.416e-6■■□□□ 12.8
PRPF8Q6P2Q9 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.466e-6■■□□□ 12.8
PRPF8Q6P2Q9 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC5.89□□□□□ -1.476e-6■■□□□ 12.8
PRPF8Q6P2Q9 VARS-222ENST00000470953 392 ntTSL 35.82□□□□□ -1.486e-6■■□□□ 12.8
PRPF8Q6P2Q9 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.42□□□□□ -1.546e-6■■□□□ 12.8
PRPF8Q6P2Q9 MAP2K5-205ENST00000439036 429 ntTSL 35.38□□□□□ -1.556e-6■■□□□ 12.8
PRPF8Q6P2Q9 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.576e-6■■□□□ 12.8
PRPF8Q6P2Q9 GPD2-204ENST00000409861 2640 ntTSL 54.99□□□□□ -1.616e-6■■□□□ 12.8
PRPF8Q6P2Q9 MAP2K5-210ENST00000559262 814 ntTSL 54.97□□□□□ -1.616e-6■■□□□ 12.8
PRPF8Q6P2Q9 MAP2K5-212ENST00000560591 1457 ntTSL 34.27□□□□□ -1.736e-8■■□□□ 12.8
PRPF8Q6P2Q9 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.23□□□□□ -1.736e-6■■□□□ 12.8
PRPF8Q6P2Q9 CDCA2-204ENST00000521098 2409 ntTSL 54.02□□□□□ -1.776e-6■■□□□ 12.8
PRPF8Q6P2Q9 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.036e-6■■□□□ 12.8
PRPF8Q6P2Q9 MDC1-208ENST00000494654 148 ntTSL 31.82□□□□□ -2.126e-6■■□□□ 12.8
PRPF8Q6P2Q9 AC135050.2-201ENST00000533518 2362 ntTSL 1 (best)12.09□□□□□ -0.473e-6■■□□□ 12.8
PRPF8Q6P2Q9 LRRC8D-205ENST00000525774 588 ntTSL 420.6■□□□□ 0.892e-15■■□□□ 12.8
PRPF8Q6P2Q9 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.222e-15■■□□□ 12.8
PRPF8Q6P2Q9 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.572e-15■■□□□ 12.8
PRPF8Q6P2Q9 SLC13A5-212ENST00000576323 574 ntTSL 414.23□□□□□ -0.137e-23■■□□□ 12.8
PRPF8Q6P2Q9 SLC13A5-206ENST00000572352 538 ntTSL 413.09□□□□□ -0.317e-23■■□□□ 12.8
PRPF8Q6P2Q9 SLC13A5-205ENST00000572094 986 ntTSL 512.96□□□□□ -0.337e-23■■□□□ 12.8
PRPF8Q6P2Q9 SLC13A5-211ENST00000575230 547 ntTSL 512.96□□□□□ -0.337e-23■■□□□ 12.8
PRPF8Q6P2Q9 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC10.27□□□□□ -0.776e-8■■□□□ 12.8
PRPF8Q6P2Q9 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC10.27□□□□□ -0.776e-8■■□□□ 12.8
PRPF8Q6P2Q9 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC5.58□□□□□ -1.525e-11■■□□□ 12.8
PRPF8Q6P2Q9 MAGED2-212ENST00000497484 990 ntTSL 212.94□□□□□ -0.345e-7■■□□□ 12.8
PRPF8Q6P2Q9 MAGED2-209ENST00000485483 691 ntTSL 210.54□□□□□ -0.725e-7■■□□□ 12.8
PRPF8Q6P2Q9 EPN1-207ENST00000591743 593 ntTSL 416.53■□□□□ 0.241e-6■■□□□ 12.8
PRPF8Q6P2Q9 ASCC2-215ENST00000472433 536 ntTSL 310.87□□□□□ -0.672e-6■■□□□ 12.8
PRPF8Q6P2Q9 DDI2-205ENST00000546927 592 ntTSL 216.96■□□□□ 0.311e-8■■□□□ 12.8
PRPF8Q6P2Q9 DDI2-204ENST00000486680 1501 ntTSL 1 (best)13.23□□□□□ -0.291e-8■■□□□ 12.8
PRPF8Q6P2Q9 SEC13-212ENST00000432213 594 ntTSL 412.42□□□□□ -0.423e-18■■□□□ 12.8
PRPF8Q6P2Q9 XBP1-206ENST00000484256 2173 ntTSL 29.55□□□□□ -0.881e-13■■□□□ 12.8
PRPF8Q6P2Q9 ATP5J2-212ENST00000524321 584 ntTSL 210.17□□□□□ -0.784e-10■■□□□ 12.8
PRPF8Q6P2Q9 ATP5J2-208ENST00000485011 597 ntTSL 29.13□□□□□ -0.954e-10■■□□□ 12.8
PRPF8Q6P2Q9 ATP5J2-211ENST00000523680 84 ntTSL 38.8□□□□□ -14e-10■■□□□ 12.8
PRPF8Q6P2Q9 INTS3-209ENST00000503133 1896 ntTSL 26.56□□□□□ -1.362e-6■■□□□ 12.8
PRPF8Q6P2Q9 RBM39-224ENST00000463098 869 ntTSL 212.12□□□□□ -0.473e-9■■□□□ 12.8
PRPF8Q6P2Q9 RBM39-222ENST00000461849 861 ntTSL 211.74□□□□□ -0.533e-9■■□□□ 12.8
PRPF8Q6P2Q9 EPC1-207ENST00000479380 817 ntTSL 57.77□□□□□ -1.177e-7■■□□□ 12.8
PRPF8Q6P2Q9 WASHC5-205ENST00000521109 545 ntTSL 417.31■□□□□ 0.369e-6■■□□□ 12.8
PRPF8Q6P2Q9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.09■□□□□ 0.339e-6■■□□□ 12.8
PRPF8Q6P2Q9 WASHC5-204ENST00000519340 461 ntTSL 415.57■□□□□ 0.089e-6■■□□□ 12.8
PRPF8Q6P2Q9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.44■□□□□ 0.069e-6■■□□□ 12.8
PRPF8Q6P2Q9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.019e-6■■□□□ 12.8
PRPF8Q6P2Q9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.149e-6■■□□□ 12.8
PRPF8Q6P2Q9 NPRL2-217ENST00000493907 835 ntTSL 213.87□□□□□ -0.191e-6■■□□□ 12.8
PRPF8Q6P2Q9 VPS53-215ENST00000573028 3204 ntTSL 213.1□□□□□ -0.319e-6■■□□□ 12.8
PRPF8Q6P2Q9 NPRL2-210ENST00000469839 971 ntTSL 212.79□□□□□ -0.361e-6■■□□□ 12.8
PRPF8Q6P2Q9 AMPD2-207ENST00000467071 556 ntTSL 210.75□□□□□ -0.699e-6■■□□□ 12.8
PRPF8Q6P2Q9 TRAF3IP1-204ENST00000462122 922 ntTSL 39.72□□□□□ -0.859e-6■■□□□ 12.8
PRPF8Q6P2Q9 VPS53-202ENST00000389040 1903 ntTSL 1 (best)8.28□□□□□ -1.089e-6■■□□□ 12.8
PRPF8Q6P2Q9 VPS53-203ENST00000401468 1269 ntTSL 1 (best) BASIC7.87□□□□□ -1.159e-6■■□□□ 12.8
PRPF8Q6P2Q9 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.518e-11■■□□□ 12.8
PRPF8Q6P2Q9 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.698e-11■■□□□ 12.8
PRPF8Q6P2Q9 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC10.72□□□□□ -0.698e-11■■□□□ 12.8
PRPF8Q6P2Q9 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.43e-7■■□□□ 12.8
PRPF8Q6P2Q9 CORO7-207ENST00000571059 581 ntTSL 317.67■□□□□ 0.428e-7■■□□□ 12.8
PRPF8Q6P2Q9 CORO7-211ENST00000572044 563 ntTSL 416.45■□□□□ 0.228e-7■■□□□ 12.8
PRPF8Q6P2Q9 CORO7-229ENST00000576051 557 ntTSL 516.31■□□□□ 0.28e-7■■□□□ 12.8
PRPF8Q6P2Q9 CORO7-233ENST00000577144 618 ntTSL 315.8■□□□□ 0.128e-7■■□□□ 12.8
PRPF8Q6P2Q9 CORO7-203ENST00000570645 501 ntTSL 514.58□□□□□ -0.088e-7■■□□□ 12.8
PRPF8Q6P2Q9 CORO7-214ENST00000572153 548 ntTSL 414.49□□□□□ -0.098e-7■■□□□ 12.8
PRPF8Q6P2Q9 CORO7-225ENST00000575038 832 ntTSL 514.46□□□□□ -0.18e-7■■□□□ 12.8
PRPF8Q6P2Q9 CORO7-216ENST00000572549 663 ntTSL 514.26□□□□□ -0.138e-7■■□□□ 12.8
PRPF8Q6P2Q9 CORO7-228ENST00000575850 666 ntTSL 514.01□□□□□ -0.178e-7■■□□□ 12.8
PRPF8Q6P2Q9 CORO7-218ENST00000572898 593 ntTSL 313.23□□□□□ -0.298e-7■■□□□ 12.8
PRPF8Q6P2Q9 CORO7-205ENST00000570928 540 ntTSL 512.75□□□□□ -0.378e-7■■□□□ 12.8
PRPF8Q6P2Q9 CORO7-206ENST00000571052 578 ntTSL 412.68□□□□□ -0.388e-7■■□□□ 12.8
PRPF8Q6P2Q9 CORO7-231ENST00000576457 571 ntTSL 411.51□□□□□ -0.578e-7■■□□□ 12.8
PRPF8Q6P2Q9 ARHGEF11-206ENST00000487682 4796 ntTSL 28.42□□□□□ -1.062e-6■■□□□ 12.8
Retrieved 100 of 73,762 protein–RNA pairs in 545.2 ms