RNA–Protein interactions for RNA: ENST00000409125.8

GPD2-202, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 2,661 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-202ENST00000409125 NISCHQ9Y2I1 1504 aa16.62■□□□□ 0.25
GPD2-202ENST00000409125 PELP1Q8IZL8 1130 aaKnown RBP15.52■□□□□ 0.07
GPD2-202ENST00000409125 MYT1Q01538 1121 aa15.33■□□□□ 0.05
GPD2-202ENST00000409125 HRCP23327 699 aa14.98□□□□□ -0.01
GPD2-202ENST00000409125 TTBK1Q5TCY1 1321 aaPredicted RBP14.83□□□□□ -0.03
GPD2-202ENST00000409125 DCAF1Q9Y4B6 1507 aa14.49□□□□□ -0.09
GPD2-202ENST00000409125 PRKCSHP14314 528 aaPredicted RBP14.43□□□□□ -0.1
GPD2-202ENST00000409125 MYO15BQ96JP2 1530 aa14.4□□□□□ -0.1
GPD2-202ENST00000409125 CCDC180Q9P1Z9 1646 aa14.37□□□□□ -0.11
GPD2-202ENST00000409125 PCGF6Q9BYE7 350 aa14.37□□□□□ -0.11
GPD2-202ENST00000409125 CHIC1Q5VXU3 224 aa14.32□□□□□ -0.12
GPD2-202ENST00000409125 ZEB1P37275 1124 aaPredicted RBP14.28□□□□□ -0.12
GPD2-202ENST00000409125 PPARGC1BQ86YN6 1023 aaKnown RBP14.28□□□□□ -0.12
GPD2-202ENST00000409125 SUPT5HO00267 1087 aaKnown RBP14.26□□□□□ -0.13
GPD2-202ENST00000409125 SHROOM4Q9ULL8 1493 aa14.23□□□□□ -0.13
GPD2-202ENST00000409125 ZCCHC6Q5VYS8 1495 aaKnown RBP14.21□□□□□ -0.13
GPD2-202ENST00000409125 APLP2Q06481 763 aa14.19□□□□□ -0.14
GPD2-202ENST00000409125 TRIM26Q12899 539 aaPredicted RBP14.16□□□□□ -0.14
GPD2-202ENST00000409125 SLC24A1O60721 1099 aa14.16□□□□□ -0.14
GPD2-202ENST00000409125 ERICH6Q7L0X2 663 aa14.14□□□□□ -0.15
GPD2-202ENST00000409125 SCAF1Q9H7N4 1312 aaKnown RBP14.08□□□□□ -0.16
GPD2-202ENST00000409125 BCL11AQ9H165 835 aa13.98□□□□□ -0.17
GPD2-202ENST00000409125 ACIN1Q9UKV3 1341 aaKnown RBP13.84□□□□□ -0.19
GPD2-202ENST00000409125 FAM9AQ8IZU1 332 aaPredicted RBP13.8□□□□□ -0.2
GPD2-202ENST00000409125 CENPBP07199 599 aaPredicted RBP13.75□□□□□ -0.21
GPD2-202ENST00000409125 LOC105371045A0A1W2PR82 267 aa13.74□□□□□ -0.21
GPD2-202ENST00000409125 NEUROD1Q13562 356 aa13.64□□□□□ -0.23
GPD2-202ENST00000409125 DAXXQ9UER7 740 aaPredicted RBP13.6□□□□□ -0.23
GPD2-202ENST00000409125 GTF3C3Q9Y5Q9 886 aa13.59□□□□□ -0.23
GPD2-202ENST00000409125 ABCC9O60706 1549 aa13.56□□□□□ -0.24
GPD2-202ENST00000409125 DIEXFQ68CQ4 756 aaKnown RBP13.48□□□□□ -0.25
GPD2-202ENST00000409125 CLSPNQ9HAW4 1339 aa13.43□□□□□ -0.26
GPD2-202ENST00000409125 RB1CC1Q8TDY2 1594 aa13.4□□□□□ -0.26
GPD2-202ENST00000409125 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
GPD2-202ENST00000409125 CCER1Q8TC90 406 aaPredicted RBP13.36□□□□□ -0.27
GPD2-202ENST00000409125 RSF1Q96T23 1441 aaPredicted RBP13.31□□□□□ -0.28
GPD2-202ENST00000409125 WRNQ14191 1432 aaPredicted RBP eCLIP13.31□□□□□ -0.28
GPD2-202ENST00000409125 ZNF316A6NFI3 1004 aaPredicted RBP13.28□□□□□ -0.28
GPD2-202ENST00000409125 EIF5BO60841 1220 aaKnown RBP13.27□□□□□ -0.29
GPD2-202ENST00000409125 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.25□□□□□ -0.29
GPD2-202ENST00000409125 ANP32EQ9BTT0 268 aa13.23□□□□□ -0.29
GPD2-202ENST00000409125 DCAF8L2P0C7V8 631 aa13.17□□□□□ -0.3
GPD2-202ENST00000409125 EIF4G1Q04637 1599 aaKnown RBP13.08□□□□□ -0.32
GPD2-202ENST00000409125 UBE2Q2Q8WVN8 375 aa13.06□□□□□ -0.32
GPD2-202ENST00000409125 CSRNP3Q8WYN3 585 aa13.06□□□□□ -0.32
GPD2-202ENST00000409125 MIER1Q8N108 512 aa13.04□□□□□ -0.32
GPD2-202ENST00000409125 AEBP2Q6ZN18 517 aaPredicted RBP13.02□□□□□ -0.33
GPD2-202ENST00000409125 YTHDC1Q96MU7 727 aaKnown RBP13.01□□□□□ -0.33
GPD2-202ENST00000409125 TNIKQ9UKE5 1360 aa13.01□□□□□ -0.33
GPD2-202ENST00000409125 EEA1Q15075 1411 aa13.01□□□□□ -0.33
GPD2-202ENST00000409125 SUPT16HQ9Y5B9 1047 aaKnown RBP13□□□□□ -0.33
GPD2-202ENST00000409125 CEP162Q5TB80 1403 aa12.99□□□□□ -0.33
GPD2-202ENST00000409125 SCRIBQ14160 1630 aa12.97□□□□□ -0.33
GPD2-202ENST00000409125 TSHZ2Q9NRE2 1034 aa12.96□□□□□ -0.33
GPD2-202ENST00000409125 BAZ1AQ9NRL2 1556 aaPredicted RBP12.96□□□□□ -0.33
GPD2-202ENST00000409125 PLEKHG5O94827 1062 aa12.95□□□□□ -0.34
GPD2-202ENST00000409125 ANO8Q9HCE9 1232 aaPredicted RBP12.92□□□□□ -0.34
GPD2-202ENST00000409125 MROH2BQ7Z745 1585 aa12.86□□□□□ -0.35
GPD2-202ENST00000409125 GOLGA3Q08378 1498 aa12.83□□□□□ -0.35
GPD2-202ENST00000409125 WIZO95785 1651 aa12.83□□□□□ -0.36
GPD2-202ENST00000409125 MYT1LQ9UL68 1186 aa12.8□□□□□ -0.36
GPD2-202ENST00000409125 EHMT2Q96KQ7 1210 aa12.79□□□□□ -0.36
GPD2-202ENST00000409125 NACADO15069 1562 aa12.79□□□□□ -0.36
GPD2-202ENST00000409125 KIF21BO75037 1637 aa12.78□□□□□ -0.36
GPD2-202ENST00000409125 PODXL2Q9NZ53 605 aa12.77□□□□□ -0.37
GPD2-202ENST00000409125 TOP2AP11388 1531 aaKnown RBP12.76□□□□□ -0.37
GPD2-202ENST00000409125 CECR2Q9BXF3 1484 aa12.76□□□□□ -0.37
GPD2-202ENST00000409125 CCDC88BA6NC98 1476 aa12.75□□□□□ -0.37
GPD2-202ENST00000409125 ABCC8Q09428 1581 aa12.73□□□□□ -0.37
GPD2-202ENST00000409125 BAZ1BQ9UIG0 1483 aaKnown RBP12.72□□□□□ -0.37
GPD2-202ENST00000409125 VPS8Q8N3P4 1428 aa12.72□□□□□ -0.37
GPD2-202ENST00000409125 CEP164Q9UPV0 1460 aa12.71□□□□□ -0.37
GPD2-202ENST00000409125 PKNOX2Q96KN3 472 aa12.71□□□□□ -0.38
GPD2-202ENST00000409125 CUX2O14529 1486 aa12.67□□□□□ -0.38
GPD2-202ENST00000409125 DHX57Q6P158 1386 aaKnown RBP12.67□□□□□ -0.38
GPD2-202ENST00000409125 SOGA1O94964 1423 aa12.67□□□□□ -0.38
GPD2-202ENST00000409125 SMARCA2P51531 1590 aa12.66□□□□□ -0.38
GPD2-202ENST00000409125 RBM19Q9Y4C8 960 aaKnown RBP12.65□□□□□ -0.38
GPD2-202ENST00000409125 FANCIQ9NVI1 1328 aa12.65□□□□□ -0.38
GPD2-202ENST00000409125 CLIP1P30622 1438 aa12.63□□□□□ -0.39
GPD2-202ENST00000409125 HNRNPUL2Q1KMD3 747 aaKnown RBP12.62□□□□□ -0.39
GPD2-202ENST00000409125 NEFLP07196 543 aa12.61□□□□□ -0.39
GPD2-202ENST00000409125 UBTFP17480 764 aaKnown RBP12.61□□□□□ -0.39
GPD2-202ENST00000409125 SALL2Q9Y467 1007 aaPredicted RBP12.61□□□□□ -0.39
GPD2-202ENST00000409125 ERICH6BQ5W0A0 696 aa12.59□□□□□ -0.39
GPD2-202ENST00000409125 SMARCA4P51532 1647 aa12.56□□□□□ -0.4
GPD2-202ENST00000409125 FKBP8Q14318 412 aa12.55□□□□□ -0.4
GPD2-202ENST00000409125 RRBP1Q9P2E9 1410 aaKnown RBP12.55□□□□□ -0.4
GPD2-202ENST00000409125 RUSC2Q8N2Y8 1516 aa12.54□□□□□ -0.4
GPD2-202ENST00000409125 CCER2I3L3R5 266 aa12.54□□□□□ -0.4
GPD2-202ENST00000409125 NCBP3Q53F19 620 aaKnown RBP12.53□□□□□ -0.4
GPD2-202ENST00000409125 CCDC136Q96JN2 1154 aa12.49□□□□□ -0.41
GPD2-202ENST00000409125 ERICH3Q5RHP9 1530 aa12.48□□□□□ -0.41
GPD2-202ENST00000409125 MSH5O43196 834 aa12.47□□□□□ -0.41
GPD2-202ENST00000409125 TIMELESSQ9UNS1 1208 aa12.47□□□□□ -0.41
GPD2-202ENST00000409125 SYNJ1O43426 1573 aa12.45□□□□□ -0.42
GPD2-202ENST00000409125 BCANQ96GW7 911 aa12.44□□□□□ -0.42
GPD2-202ENST00000409125 CDK11AQ9UQ88 783 aaPredicted RBP12.43□□□□□ -0.42
GPD2-202ENST00000409125 MAPKBP1O60336 1514 aa12.41□□□□□ -0.42
GPD2-202ENST00000409125 PEG3Q9GZU2 1588 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms