Protein–RNA interactions for Protein: Q9Y5F1

PCDHB12, Protocadherin beta-12, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12Q9Y5F1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB12Q9Y5F1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PCDHB12Q9Y5F1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHB12Q9Y5F1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB12Q9Y5F1 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHB12Q9Y5F1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB12Q9Y5F1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
PCDHB12Q9Y5F1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDHB12Q9Y5F1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHB12Q9Y5F1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHB12Q9Y5F1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHB12Q9Y5F1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDHB12Q9Y5F1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDHB12Q9Y5F1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB12Q9Y5F1 AC010331.1-201ENST00000611423 582 ntBASIC21.79■■□□□ 1.08
PCDHB12Q9Y5F1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHB12Q9Y5F1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB12Q9Y5F1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB12Q9Y5F1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB12Q9Y5F1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB12Q9Y5F1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB12Q9Y5F1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB12Q9Y5F1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB12Q9Y5F1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHB12Q9Y5F1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB12Q9Y5F1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB12Q9Y5F1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB12Q9Y5F1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDHB12Q9Y5F1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHB12Q9Y5F1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB12Q9Y5F1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB12Q9Y5F1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHB12Q9Y5F1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.78■■□□□ 1.08
PCDHB12Q9Y5F1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB12Q9Y5F1 AC133561.5-201ENST00000635547 218 ntBASIC21.78■■□□□ 1.08
PCDHB12Q9Y5F1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB12Q9Y5F1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDHB12Q9Y5F1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB12Q9Y5F1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB12Q9Y5F1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB12Q9Y5F1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB12Q9Y5F1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHB12Q9Y5F1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHB12Q9Y5F1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB12Q9Y5F1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB12Q9Y5F1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB12Q9Y5F1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB12Q9Y5F1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB12Q9Y5F1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB12Q9Y5F1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB12Q9Y5F1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHB12Q9Y5F1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHB12Q9Y5F1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHB12Q9Y5F1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHB12Q9Y5F1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB12Q9Y5F1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB12Q9Y5F1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB12Q9Y5F1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB12Q9Y5F1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB12Q9Y5F1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB12Q9Y5F1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PCDHB12Q9Y5F1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDHB12Q9Y5F1 AC087499.1-201ENST00000418141 1075 ntBASIC21.76■■□□□ 1.07
PCDHB12Q9Y5F1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB12Q9Y5F1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDHB12Q9Y5F1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDHB12Q9Y5F1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
PCDHB12Q9Y5F1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHB12Q9Y5F1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB12Q9Y5F1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHB12Q9Y5F1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB12Q9Y5F1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB12Q9Y5F1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB12Q9Y5F1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB12Q9Y5F1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PCDHB12Q9Y5F1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB12Q9Y5F1 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHB12Q9Y5F1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHB12Q9Y5F1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.75■■□□□ 1.07
PCDHB12Q9Y5F1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHB12Q9Y5F1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHB12Q9Y5F1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PCDHB12Q9Y5F1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB12Q9Y5F1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PCDHB12Q9Y5F1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB12Q9Y5F1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB12Q9Y5F1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB12Q9Y5F1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHB12Q9Y5F1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB12Q9Y5F1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.74■■□□□ 1.07
PCDHB12Q9Y5F1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB12Q9Y5F1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB12Q9Y5F1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB12Q9Y5F1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHB12Q9Y5F1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDHB12Q9Y5F1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
PCDHB12Q9Y5F1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB12Q9Y5F1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHB12Q9Y5F1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB12Q9Y5F1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms