Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHB3Q9Y5E6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB3Q9Y5E6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHB3Q9Y5E6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB3Q9Y5E6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHB3Q9Y5E6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB3Q9Y5E6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB3Q9Y5E6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PCDHB3Q9Y5E6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB3Q9Y5E6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB3Q9Y5E6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB3Q9Y5E6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHB3Q9Y5E6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB3Q9Y5E6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB3Q9Y5E6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB3Q9Y5E6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB3Q9Y5E6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB3Q9Y5E6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PCDHB3Q9Y5E6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHB3Q9Y5E6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PCDHB3Q9Y5E6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHB3Q9Y5E6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.75■□□□□ 0.75
PCDHB3Q9Y5E6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB3Q9Y5E6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PCDHB3Q9Y5E6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB3Q9Y5E6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PCDHB3Q9Y5E6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PCDHB3Q9Y5E6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB3Q9Y5E6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB3Q9Y5E6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB3Q9Y5E6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB3Q9Y5E6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB3Q9Y5E6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB3Q9Y5E6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB3Q9Y5E6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB3Q9Y5E6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB3Q9Y5E6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB3Q9Y5E6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHB3Q9Y5E6 AC100791.3-201ENST00000617619 330 ntBASIC19.74■□□□□ 0.75
PCDHB3Q9Y5E6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
PCDHB3Q9Y5E6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB3Q9Y5E6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB3Q9Y5E6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB3Q9Y5E6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB3Q9Y5E6 AC007952.6-201ENST00000573168 2673 ntBASIC19.74■□□□□ 0.75
PCDHB3Q9Y5E6 AC003957.1-201ENST00000625108 2673 ntBASIC19.74■□□□□ 0.75
PCDHB3Q9Y5E6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PCDHB3Q9Y5E6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHB3Q9Y5E6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB3Q9Y5E6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB3Q9Y5E6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHB3Q9Y5E6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB3Q9Y5E6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.73■□□□□ 0.75
PCDHB3Q9Y5E6 AC093827.2-201ENST00000512654 315 ntBASIC19.73■□□□□ 0.75
PCDHB3Q9Y5E6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.73■□□□□ 0.75
PCDHB3Q9Y5E6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PCDHB3Q9Y5E6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
PCDHB3Q9Y5E6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB3Q9Y5E6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB3Q9Y5E6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PCDHB3Q9Y5E6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB3Q9Y5E6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PCDHB3Q9Y5E6 AC027702.1-201ENST00000563810 1770 ntBASIC19.72■□□□□ 0.75
PCDHB3Q9Y5E6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB3Q9Y5E6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB3Q9Y5E6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB3Q9Y5E6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB3Q9Y5E6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PCDHB3Q9Y5E6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB3Q9Y5E6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB3Q9Y5E6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
PCDHB3Q9Y5E6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHB3Q9Y5E6 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.72■□□□□ 0.75
PCDHB3Q9Y5E6 AC008687.6-201ENST00000596318 630 ntBASIC19.72■□□□□ 0.75
PCDHB3Q9Y5E6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PCDHB3Q9Y5E6 AC121338.2-201ENST00000622535 1744 ntBASIC19.72■□□□□ 0.75
PCDHB3Q9Y5E6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PCDHB3Q9Y5E6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB3Q9Y5E6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB3Q9Y5E6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHB3Q9Y5E6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB3Q9Y5E6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB3Q9Y5E6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHB3Q9Y5E6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHB3Q9Y5E6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB3Q9Y5E6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB3Q9Y5E6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDHB3Q9Y5E6 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.71■□□□□ 0.75
PCDHB3Q9Y5E6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
PCDHB3Q9Y5E6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDHB3Q9Y5E6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.71■□□□□ 0.75
PCDHB3Q9Y5E6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.71■□□□□ 0.75
PCDHB3Q9Y5E6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDHB3Q9Y5E6 MYC-209ENST00000641252 345 ntBASIC19.71■□□□□ 0.75
PCDHB3Q9Y5E6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHB3Q9Y5E6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
PCDHB3Q9Y5E6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB3Q9Y5E6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB3Q9Y5E6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
PCDHB3Q9Y5E6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms