Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FNDC3AQ9Y2H6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
FNDC3AQ9Y2H6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FNDC3AQ9Y2H6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
FNDC3AQ9Y2H6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FNDC3AQ9Y2H6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
FNDC3AQ9Y2H6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.6■□□□□ 0.89
FNDC3AQ9Y2H6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FNDC3AQ9Y2H6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
FNDC3AQ9Y2H6 LSM12P1-201ENST00000411836 588 ntBASIC20.6■□□□□ 0.89
FNDC3AQ9Y2H6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.6■□□□□ 0.89
FNDC3AQ9Y2H6 UNC93B4-201ENST00000505679 747 ntBASIC20.6■□□□□ 0.89
FNDC3AQ9Y2H6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.6■□□□□ 0.89
FNDC3AQ9Y2H6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FNDC3AQ9Y2H6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FNDC3AQ9Y2H6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.6■□□□□ 0.89
FNDC3AQ9Y2H6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FNDC3AQ9Y2H6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FNDC3AQ9Y2H6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FNDC3AQ9Y2H6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
FNDC3AQ9Y2H6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.59■□□□□ 0.89
FNDC3AQ9Y2H6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
FNDC3AQ9Y2H6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FNDC3AQ9Y2H6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
FNDC3AQ9Y2H6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FNDC3AQ9Y2H6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FNDC3AQ9Y2H6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FNDC3AQ9Y2H6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
FNDC3AQ9Y2H6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FNDC3AQ9Y2H6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.59■□□□□ 0.89
FNDC3AQ9Y2H6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.59■□□□□ 0.89
FNDC3AQ9Y2H6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
FNDC3AQ9Y2H6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.59■□□□□ 0.89
FNDC3AQ9Y2H6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
FNDC3AQ9Y2H6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
FNDC3AQ9Y2H6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FNDC3AQ9Y2H6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
FNDC3AQ9Y2H6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FNDC3AQ9Y2H6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FNDC3AQ9Y2H6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FNDC3AQ9Y2H6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FNDC3AQ9Y2H6 AC007322.3-201ENST00000426526 701 ntBASIC20.58■□□□□ 0.89
FNDC3AQ9Y2H6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.58■□□□□ 0.89
FNDC3AQ9Y2H6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.58■□□□□ 0.89
FNDC3AQ9Y2H6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.58■□□□□ 0.89
FNDC3AQ9Y2H6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.58■□□□□ 0.89
FNDC3AQ9Y2H6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.58■□□□□ 0.89
FNDC3AQ9Y2H6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
FNDC3AQ9Y2H6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
FNDC3AQ9Y2H6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FNDC3AQ9Y2H6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
FNDC3AQ9Y2H6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
FNDC3AQ9Y2H6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.58■□□□□ 0.88
FNDC3AQ9Y2H6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
FNDC3AQ9Y2H6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
FNDC3AQ9Y2H6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
FNDC3AQ9Y2H6 AC006128.1-201ENST00000624704 1661 ntBASIC20.58■□□□□ 0.88
FNDC3AQ9Y2H6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 AC011484.1-201ENST00000377652 1995 ntBASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 CDV3P1-201ENST00000471403 739 ntBASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 KRT17P1-201ENST00000399211 1546 ntBASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FNDC3AQ9Y2H6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
FNDC3AQ9Y2H6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FNDC3AQ9Y2H6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FNDC3AQ9Y2H6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
FNDC3AQ9Y2H6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FNDC3AQ9Y2H6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.56■□□□□ 0.88
FNDC3AQ9Y2H6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FNDC3AQ9Y2H6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
FNDC3AQ9Y2H6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
FNDC3AQ9Y2H6 AL355472.2-201ENST00000422958 438 ntBASIC20.56■□□□□ 0.88
FNDC3AQ9Y2H6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.56■□□□□ 0.88
FNDC3AQ9Y2H6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FNDC3AQ9Y2H6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FNDC3AQ9Y2H6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FNDC3AQ9Y2H6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FNDC3AQ9Y2H6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
FNDC3AQ9Y2H6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.56■□□□□ 0.88
FNDC3AQ9Y2H6 FP700111.2-201ENST00000619190 1892 ntBASIC20.56■□□□□ 0.88
FNDC3AQ9Y2H6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FNDC3AQ9Y2H6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms