Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP2BQ9UQN3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.54■□□□□ 0.88
CHMP2BQ9UQN3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CHMP2BQ9UQN3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP2BQ9UQN3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP2BQ9UQN3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CHMP2BQ9UQN3 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.54■□□□□ 0.88
CHMP2BQ9UQN3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 AC125437.2-201ENST00000625180 2167 ntBASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.53■□□□□ 0.88
CHMP2BQ9UQN3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CHMP2BQ9UQN3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP2BQ9UQN3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP2BQ9UQN3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP2BQ9UQN3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP2BQ9UQN3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP2BQ9UQN3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP2BQ9UQN3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.52■□□□□ 0.88
CHMP2BQ9UQN3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.52■□□□□ 0.88
CHMP2BQ9UQN3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.52■□□□□ 0.87
CHMP2BQ9UQN3 AC019069.1-201ENST00000610008 1333 ntBASIC20.52■□□□□ 0.87
CHMP2BQ9UQN3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.87
CHMP2BQ9UQN3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2BQ9UQN3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 AL158211.5-201ENST00000623583 2518 ntBASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMP2BQ9UQN3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.49■□□□□ 0.87
CHMP2BQ9UQN3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP2BQ9UQN3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CHMP2BQ9UQN3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
CHMP2BQ9UQN3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP2BQ9UQN3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.49■□□□□ 0.87
CHMP2BQ9UQN3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CHMP2BQ9UQN3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms