Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH9Q9ULB4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDH9Q9ULB4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.41■■□□□ 1.02
CDH9Q9ULB4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH9Q9ULB4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDH9Q9ULB4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH9Q9ULB4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CDH9Q9ULB4 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.41■■□□□ 1.02
CDH9Q9ULB4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDH9Q9ULB4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CDH9Q9ULB4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.41■■□□□ 1.02
CDH9Q9ULB4 AC008687.6-201ENST00000596318 630 ntBASIC21.41■■□□□ 1.02
CDH9Q9ULB4 AC006557.6-201ENST00000623071 864 ntBASIC21.41■■□□□ 1.02
CDH9Q9ULB4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH9Q9ULB4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH9Q9ULB4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CDH9Q9ULB4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDH9Q9ULB4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CDH9Q9ULB4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH9Q9ULB4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH9Q9ULB4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH9Q9ULB4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDH9Q9ULB4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH9Q9ULB4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH9Q9ULB4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CDH9Q9ULB4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH9Q9ULB4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
CDH9Q9ULB4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH9Q9ULB4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDH9Q9ULB4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.4■■□□□ 1.02
CDH9Q9ULB4 KRT17P3-201ENST00000420566 1262 ntBASIC21.4■■□□□ 1.02
CDH9Q9ULB4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CDH9Q9ULB4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH9Q9ULB4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.4■■□□□ 1.02
CDH9Q9ULB4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.4■■□□□ 1.02
CDH9Q9ULB4 AC073648.6-201ENST00000641589 218 ntBASIC21.4■■□□□ 1.02
CDH9Q9ULB4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.4■■□□□ 1.02
CDH9Q9ULB4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDH9Q9ULB4 AL137060.1-201ENST00000618151 2648 ntBASIC21.4■■□□□ 1.02
CDH9Q9ULB4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.4■■□□□ 1.02
CDH9Q9ULB4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
CDH9Q9ULB4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.39■■□□□ 1.02
CDH9Q9ULB4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDH9Q9ULB4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDH9Q9ULB4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.39■■□□□ 1.02
CDH9Q9ULB4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CDH9Q9ULB4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDH9Q9ULB4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDH9Q9ULB4 PRORSD1P-201ENST00000295112 541 ntBASIC21.39■■□□□ 1.01
CDH9Q9ULB4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDH9Q9ULB4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDH9Q9ULB4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDH9Q9ULB4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
CDH9Q9ULB4 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.39■■□□□ 1.01
CDH9Q9ULB4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.39■■□□□ 1.01
CDH9Q9ULB4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.39■■□□□ 1.01
CDH9Q9ULB4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.39■■□□□ 1.01
CDH9Q9ULB4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.39■■□□□ 1.01
CDH9Q9ULB4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.39■■□□□ 1.01
CDH9Q9ULB4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDH9Q9ULB4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.39■■□□□ 1.01
CDH9Q9ULB4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.39■■□□□ 1.01
CDH9Q9ULB4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDH9Q9ULB4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDH9Q9ULB4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDH9Q9ULB4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.38■■□□□ 1.01
CDH9Q9ULB4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDH9Q9ULB4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDH9Q9ULB4 AC092720.2-201ENST00000602388 1665 ntBASIC21.38■■□□□ 1.01
CDH9Q9ULB4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.38■■□□□ 1.01
CDH9Q9ULB4 PTBP1P-201ENST00000554374 1601 ntBASIC21.38■■□□□ 1.01
CDH9Q9ULB4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.38■■□□□ 1.01
CDH9Q9ULB4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDH9Q9ULB4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.38■■□□□ 1.01
CDH9Q9ULB4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDH9Q9ULB4 POM121L13P-201ENST00000422362 380 ntBASIC21.38■■□□□ 1.01
CDH9Q9ULB4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.38■■□□□ 1.01
CDH9Q9ULB4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.38■■□□□ 1.01
CDH9Q9ULB4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDH9Q9ULB4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.38■■□□□ 1.01
CDH9Q9ULB4 AC120498.8-201ENST00000614275 531 ntBASIC21.38■■□□□ 1.01
CDH9Q9ULB4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDH9Q9ULB4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CDH9Q9ULB4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.38■■□□□ 1.01
CDH9Q9ULB4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDH9Q9ULB4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.38■■□□□ 1.01
CDH9Q9ULB4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.38■■□□□ 1.01
CDH9Q9ULB4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CDH9Q9ULB4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.37■■□□□ 1.01
CDH9Q9ULB4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CDH9Q9ULB4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDH9Q9ULB4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CDH9Q9ULB4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.37■■□□□ 1.01
CDH9Q9ULB4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDH9Q9ULB4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.37■■□□□ 1.01
CDH9Q9ULB4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.37■■□□□ 1.01
CDH9Q9ULB4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.36■■□□□ 1.01
CDH9Q9ULB4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.36■■□□□ 1.01
CDH9Q9ULB4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.36■■□□□ 1.01
CDH9Q9ULB4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms